Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1871 ATGGCATCTAGCTCAATGTCAGCGTCTAGCTCATGGAGTGTTAAGGACAATAAAGCCTTTGAAAGAGCTCTAGCTGTTTTCGACAAAGACGCGCCAGATCGTTGGTACAATGTGGCTCATGCTGTTGGTGGAAAAACCCCAGAGGAAGTTAAGAAACACTATGAACTTCTTGTTGAAGATGTTAAGCGTATTGAGTCGGGGAAAGTTCCGTTTCCAAATTACAAGAAAAGTTCAGTCTCTCAAGAAGAGAAAAGGATGAGGAACCTGAGCCTTCATTGA 279 0.4301 MASSSMSASSSWSVKDNKAFERALAVFDKDAPDRWYNVAHAVGGKTPEEVKKHYELLVEDVKRIESGKVPFPNYKKSSVSQEEKRMRNLSLH* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1871 92 SMART sant 8 60 IPR001005 -
Psa3g1871 92 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Psa3g1871 92 CDD SANT 18 58 IPR001005 -
Psa3g1871 92 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Psa3g1871 92 Gene3D - 2 71 - -
Psa3g1871 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 91 IPR044636 GO:0003700
Psa3g1871 92 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1871 Psa-Chr3 169983553 169984534 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1871 - - gmx:100818368 155.606