Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1868 ATGCACAAAATCGTTCAAAGGGTGCGATTCTTGAATCGCGCGCCAATTCTAACACACTCAAACTCGGACCAATCGCAACTTCTTTCCAACTTTTCAAACCATGCTACCATTGATACAAATCCAACGTTTTCGTCTTATGCTTCCATCGATAGAGCTCGCACAGTTGAATCTCTTGATTTTCGGGAAATTACAAGCACAAGAGAACTTAGGAATGCATTTGACAAATACAATAGGAACGTTTTGTCTCGATGCCTGAACTGGACTTCGGGGGCAATTGATAATCATCATGCAGCCAGCTATGTGGTAAACCGTCATTTTACAGCCGATCACAATGATAAATGCACAAAGGAGTTCTCAAGTAAGCATCTTAAAAATATTCCGAACTTTGTAAGGATAGTGGAGGTTGGTGCAAGGGATGGATTGCAAAATGAGAAGGTTATTGTTCCCACTGATGTGAAAATTGAATTGATAAAACTGCTAGTTTCTTCTGGGTTGTCTGTTGTTGAGGCGACAAGTTTTGTCTCACCAAAATGGGTGCCACAGTTGGCAGATGCAAAGAATGTATTGAAAGCAATTCAAGACGTTGAAGGTGCTAGCTTTCCTGTCTTAACTCCAAATCTCAAAGGTTTTGAGGCAGCTGTTGCTGCTGGAGCTAAGGAAGTGGCTGTTTTTCCTGCTGCTTCTGAATCATTCTCTAAAGCAAATCTCAACTGTGGCATTGAGGATAACCTTGCTCGTTGCCGTGATATTGCTTCAGCTTCTAGAAGCCTCAGGATCCCAGTTCGTGGATACATATCATGTGTTGTGGGATGTCCTCTGGAAGGAAAAATTGCTCCAGCAAAAGTAGCATACGTTGCAAAATCACTTTATGAGATGGGGATCTCGGAGATTTCATTAGGGGATACAATTGGTGTTGGCACACCTGGTAACGTCATTCCTATGCTTGAAGCTGTTCTTGATGTCGTTCCAATTGATAAGCTTGCTGTCCATTTTCACGATACTTATGGTCAGGCACTTTCAAATATTCTAATTTCACTACAGATGGGGATCAGCACAGTGGATTCATCTGTCTCTGGTCTTGGAGGTTGTCCATATGCCAAGGGTGCAACTGGGAATGTGGCCACTGAAGATGTTGTATATATGCTGAATGGACTTGGAGTTAAAACTAATGTGGACCTTGGAAAACTTATGCTTGCTGGGGATTTCATCTGCAAGCATTTAGGACGTGCATCTGGTTCAAAAGTCGCAACTGCATTGAATAAAGTTACAAATAGTGCCTCTAAACTGTGA 1290 0.4209 MHKIVQRVRFLNRAPILTHSNSDQSQLLSNFSNHATIDTNPTFSSYASIDRARTVESLDFREITSTRELRNAFDKYNRNVLSRCLNWTSGAIDNHHAASYVVNRHFTADHNDKCTKEFSSKHLKNIPNFVRIVEVGARDGLQNEKVIVPTDVKIELIKLLVSSGLSVVEATSFVSPKWVPQLADAKNVLKAIQDVEGASFPVLTPNLKGFEAAVAAGAKEVAVFPAASESFSKANLNCGIEDNLARCRDIASASRSLRIPVRGYISCVVGCPLEGKIAPAKVAYVAKSLYEMGISEISLGDTIGVGTPGNVIPMLEAVLDVVPIDKLAVHFHDTYGQALSNILISLQMGISTVDSSVSGLGGCPYAKGATGNVATEDVVYMLNGLGVKTNVDLGKLMLAGDFICKHLGRASGSKVATALNKVTNSASKL* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1868 429 Gene3D Aldolase class I 123 422 IPR013785 -
Psa3g1868 429 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 52 429 IPR043594 GO:0016833
Psa3g1868 429 Pfam HMGL-like 130 402 IPR000891 GO:0003824
Psa3g1868 429 ProSiteProfiles Pyruvate carboxyltransferase domain. 130 397 IPR000891 GO:0003824
Psa3g1868 429 CDD DRE_TIM_HMGL 132 405 - -
Psa3g1868 429 SUPERFAMILY Aldolase 125 414 - -
Psa3g1868 429 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 52 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1868 Psa-Chr3 169194671 169202195 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1868 K01640 - gmx:100801507 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1868 3 169194671 169202195 Psa3g1868 3 169194671 169202195 ECH