Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1854 ATGCTTTACTTTCTTATATCTTTTGTCTCCTTTGTTATGATCCTTTCAAAGTCCTTTACAAATTATAAACCACTTTCATCAAATGCGACAAAACTTGCTTCAAATGTGTTTTGTGGAAAGCTTTTTAGTTTTCTAGCTTCTAGGATCAAAACAAGGACTAGTTTTCTAGCTTTTAGTTTTTTTCAATTTTCTCTTTTCATTCAATCACCAAACAAGAGTTTAGTACTATCTAAATTTGAAGAGGATCAAAGGAAAGTTTCTCTCTTGGATTTGCATGATTTGCCATTAGATTGCATCCTTGAAAAGCTTTCACCAAATGAACTATGCAATATGGCAAAAGTGTGTAAATCTCTTAGAAAAAGTTGTAGAAGTGATTATTTATGGGAGAAGCATATGAAGATGAAATGGGGTAAAGTGTTTGGTGATGCTGCTTATAGAGAATGGAAATGTTTTGTAGCTTCAAGAAACGTTAAGAGTTCAAATCAATGCAAGAATCAGAAAAAAATACTTCATGATTTTCTTCCATTCTTTTGGGTTGAATCAAAAGCAGAAAAAGATATGAAGTTAAAGCTTGATGATTCTATTGCTTCTCTTTATCTTTCTCTTGAGATTGGAAATTTTTGGTTCCCTGCTCAAGTTTATAACCGTGAGAATGGTCATGCTGGGTTTATGATGTCATGCTATGATGCTCAACTTTGCTATGACTCAAGAACTAATACTTTTCAAGCAAGGTATTCACCTCATGGTAGATGGACAATTGAAGAAAACATAAAATGGGAGAGGCTAAGAGTGCCACCTATTGACTCTTGTTCACATGTTCTTCATATCTCTGATTGCTTAGATGATTTAAGACCTGGTGATCATGTTGAAATCCAATGGAGAAGAAACAAGGAGTTTCCTTATGGTTGGTGGTATAGTGTGATTGGTCATTTGGAAACATGTCAAGGAGAAGGAAACCATTGTCAATGTGACAATAAAGATACAGTGATTTTGGAGTTCAGACAGTATGCAACTAGTTCAAGATGGAGACAAACAATGATAAACAGAAAGAATCATAGAGAAGAAGGAAATGAGATTGAAGGTTTTTATGGAGGAATCAGAAAGTTACATAGCAAGGAGGAAATTACAAAGTGGAAGAAACTTTGGCCAACAAAAAATGTGGAATAG 1167 0.341 MLYFLISFVSFVMILSKSFTNYKPLSSNATKLASNVFCGKLFSFLASRIKTRTSFLAFSFFQFSLFIQSPNKSLVLSKFEEDQRKVSLLDLHDLPLDCILEKLSPNELCNMAKVCKSLRKSCRSDYLWEKHMKMKWGKVFGDAAYREWKCFVASRNVKSSNQCKNQKKILHDFLPFFWVESKAEKDMKLKLDDSIASLYLSLEIGNFWFPAQVYNRENGHAGFMMSCYDAQLCYDSRTNTFQARYSPHGRWTIEENIKWERLRVPPIDSCSHVLHISDCLDDLRPGDHVEIQWRRNKEFPYGWWYSVIGHLETCQGEGNHCQCDNKDTVILEFRQYATSSRWRQTMINRKNHREEGNEIEGFYGGIRKLHSKEEITKWKKLWPTKNVE* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1854 388 Pfam F-box domain 90 130 IPR001810 GO:0005515
Psa3g1854 388 Gene3D - 74 170 - -
Psa3g1854 388 PANTHER ESTS AU081301(E20138) 1 387 - -
Psa3g1854 388 PANTHER F-BOX-LIKE PROTEIN 1 387 - -
Psa3g1854 388 SUPERFAMILY F-box domain 92 157 IPR036047 GO:0005515
Psa3g1854 388 ProSiteProfiles F-box domain profile. 85 131 IPR001810 GO:0005515
Psa3g1854 388 SMART fbox_2 94 131 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1854 Psa-Chr3 168523143 168526289 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1854 - - gmx:100806109 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1854 3 168523143 168526289 Psa3g1854 3 168523143 168526289 ECH