Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1834 ATGGATACCATTAGCACTAGCAGCACAAACTCCGTGATTAGTTCTCTACAACAAAAGACACCAACAAAAATAACCAAATCCATAAAGAAAAACAACAAACCCATCAAGGTAGTTTATATTTCCAACCCTATGAAGGTTAAGACAAGTGCCTCTGAATTTATGGCACTGGTCCAAGAACTCACTGGTCAGTACGCTGAATCGCCGCCAGATCCTTCGAAATTTCAAGAGTTCGTCGACGATATCAGCGATGCTGACCCTGAGTATATTAGAATGGGTTGTGATGAAAATGATCAGATGGTTGTGGCTGTGCCTCCTCTTGTGGATTCTGTTGATCAAGTGGTGGAACCTGGTGGAGGATGCTCATATGAGGGTTTTGATGAAGATGTACTTTTGATTCCTCAGATGGTGGAGAATATTTGGGATCTGCTTCCAACAACTGCATTTTATGAAACTTTTCAACTTGATAGCTATTGA 474 0.4114 MDTISTSSTNSVISSLQQKTPTKITKSIKKNNKPIKVVYISNPMKVKTSASEFMALVQELTGQYAESPPDPSKFQEFVDDISDADPEYIRMGCDENDQMVVAVPPLVDSVDQVVEPGGGCSYEGFDEDVLLIPQMVENIWDLLPTTAFYETFQLDSY* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1834 157 PANTHER SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC 15 150 - -
Psa3g1834 157 PANTHER SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC 15 150 IPR039335 GO:0051091
Psa3g1834 157 Pfam VQ motif 40 65 IPR008889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1834 Psa-Chr3 166286685 166290251 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1834 - - mtr:MTR_7g089860 172.94