Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1821 ATGGAAGCTTGGGATGGGCCCGCCTTGCTTTTATTCAGTGATGGAAAAACTGTTGGTGCATGCCTTGATCGGAATGGACTTCGACCTGCTAGGTATTGGCGAACATCAGACAATATGGTCTATGTTGCTTCTGAGGTTGGTGTTGTACCAATGGATGAATCAAAGGTTATCTTGAAAGGCCGATTAGGTCCAGGCATGATGATAACAGTTGATTTACTTGGTGGCCAGGTCTATGAGAATATGGAGGTTAAAAAACGAGTAGCCTTATCAAACCCATATGGGGATTGGGTCAAGGAAAATCTGCGGTCTTTGAAGTCTGGGAATTTCCTTTCATCCTCTGTGATGGAGAATGATACAGTATTAAGAAACCAACAGGCATTTGGGTACTCAAGTGAAGATGTCCAGATGGTGATTGAGAGTATGGCTTCTCAAGGAAAGGAACCTACATTTTGTATGGGAGATGATATTCCATTGGCAGCATTATCTCAGAAACCTCACATGCTTTTTGATTACTTTAAGCAGCGGTTTGCACAGGTTACAAATCCTGCAATTGATCCGCTTCGAGAAGGGTTAGTTATGTCTCTTGAAGTAAATATAGGGAAAAGAAGGAATATATTGGAAATAGGACCAGAGAATGCTTCGCAGGTTATATTATCTAGTCCGGTATTGAATGAAGGGGATCTTGAGTCGTTGTTAAAAGACTCCCACTTAAAACCACAAGTGTTGCACACATTTTTTGATATAACTAAGGGGATTGATGGTTCGTTGGAGAAAGCATTAAATAAGCTCTGTGACGCTGCAGATGAAGCTGTGAGAAATGGTTCCCAGCTGTTAATTCTTTCAGACCGATCAGAAGCACTGGAACCAACTCATCCTGCAATTCCAATACTTCTTGCTGTTGGTACTGTTCATCAGCATCTAATCCAGAATGGCCTTCGGATGTCAGCATCAATTATAGCGGATACTTCTCAGTGCTTTAGCACCCATCAGTTTGCCTGTTTAGTAGGATATGGTGCAAGTGCTGTGTGTCCATACTTGGCACTGGAGACATGTCGTCAATGGCGTTTGAGTAATAAAACGGTAAATCTGATGAAGAATGGAAAGATGCCAACTGTATCAATTGAACAGGCACAGAAAAACTACTGCAAGGCTGTAAAAGCAGGTCTTCTTAAAATTCTTTCCAAAATGGGCATCTCGTTGCTTTCAAGTTACTGTGGTGCGCAGATATTTGAAATCTATGGACTAGGGAAGGAAGTTGTGGATCTTGCATTCAGCGGAAGTGTATCGAAAATTGGTGGATTAACTTTTGACGAGCTAGCTAGAGAGACTTTGTCTTTCTGGGTGAAAGCATTCTCTGAAGATACAGCTAAAAGATTGGAGAATTTTGGATTTATACAGTTCAGACCAGGAGGCGAGTATCATGCAAATAATCCGGAGATGTCGAAGTTGCTCCACAAAGCTGTTCGTCAGAAAAGCCAGAATTCCTTTTCAGTTTATCAACAATATTTGGCTAATCGACCTGTGAATGTTCTCCGCGATCTTCTTGAGTTCAAAAGTGATCGTGCCCCCATACCTGTGGGGAGGGTTGAACCTGCTTCATCTATTGTGAAACGGTTTTGCACAGGGGGGATGTCTCTTGGAGCTATATCTAGAGAAACTCATGAAGCAATTGCAATTGCAATGAACAGATTAGGTGGAAAATCAAATTCAGGGGAAGGTGGTGAGGATCCTATTCGCTGGAAACCACTTACTGATGTTGTTGATGGTTACTCTTCAACTCTTCCACATCTTAAAGGTCTTCAAAATGGGGATACTGCTACTAGTGCTATTAAACAGGTTGCTTCAGGAAGGTTTGGTGTCACTCCAACATTCTTGGCAAATGCTGATCAATTAGAAATCAAAATTGCACAAGGTGCGAAGCCTGGTGAAGGTGGACAATTGCCTGGGAAAAAAGTTAGCATGTATATTGCTAGGTTGAGAAATTCTAAACCAGGGGTTCCTCTTATATCTCCACCTCCTCATCATGACATTTACTCTATCGAGGATCTTGCTCAGTTGATATTTGATCTTCATCAGGTGAACCCTAGGGCCAAGGTATCTGTAAAACTGGTGGCTGAAGCTGGAATTGGCACTGTTGCATCTGGGGTTGCAAAGGGCAATGCAGACATTATACAGATTTCAGGACATGATGGAGGAACAGGAGCAAGCCCTATAAGTTCCATCAAACATGCAGGAGGTCCTTGGGAACTTGGACTTACGGAATCTCACCAGACACTCGTTGCAAATGGACTCAGAGAAAGGGTTATTCTCAGAGTTGATGGTGGATTTAGAAGTGGAGTTGATGTCATGATGGCAGCAATAATGGGTGCTGATGAATATGGATTTGGTTCAGTGGCAATGATTGCCACTGGGTGTGTTATGGCTCGCATTTGCCACACCAATAATTGTCCAGTTGGTGTTGCCAGTCAGAGGGAAGAGTTGCGTGCACGCTTTCCTGGTGTTCCCGGTGATCTTGTCAACCTCTTTTTATATGTAGCTGAGGAGGTAAGAGGCACTTTGGCACAGCTGGGGTATGAGAAGTTAGATGATATAATTGGCCAAACAGACTTGCTGAGACCAAGAGACATATCTCTTGTGAAAACTCAGCATCTAGATCTGAGTTATATCCTCTCTAGTGTTGGGTTACCTAAATGGAGCAGTACAGAAATCCGGAATCAGGAGCCACATACAAATGGTCCTGTTCTGGATGATGGTTTGCTAGCAGACGCAGAGATTGCAGATGCCATTGAAAATGAAAAAGCAGTCAGTAAGACTGTAAATATATACAATGTTGATCGTGCTGTCTGTGGTCGGATAGCTGGTGTTATTGCAAAGAAATACGGTGATACTGGTTTTGCTGGACAGTTGAATATAACATTTACCGGAAGTGCTGGGCAGTCATTTGGATGCTTTCTGACTCCAGGAATGAATATTCGCCTTGTAGGAGAAGCTAATGATTATGTTGGAAAGGGAATGGCTGGAGGAGAATTGGTTGTCACTCCAGTTGACAAGACAGGGTTCCAACCTGAGGATGCAGCTATTGTGGGTAACACTTGCTTGTATGGGGCAACAGGAGGGCAGGTGTTTGTAAGAGGGAAAGCTGGGGAAAGGTTTGCTGTCAGAAACTCACTTGCTGAAGCTGTAGTTGAAGGCACAGGAGATCATTGTTGTGAGTACATGACTGGTGGCTGTGTGGTTATCCTAGGAAAAGTGGGAAGAAATGTAGCTGCTGGAATGACAGGAGGGTTGGCTTATATTCTCGATGAGGACAATACTCTCATTCCCAAGATAAACAGAGAAATTGTTAAAATTCAACGAGTATCAGCGCCAGTGGGGCAGATGCAGCTGAAGAAACTAATTGAAGCCCATGTTGAAAAAACGGGTAGCAACAAAGGTGATGCTATTCTGAAGGATTGGGACAAGTATTTATCACTATTTTGGCAGTTAGTTCCACCTAGTGAAGAAGATACCCCTGAGGCCAATGCCAAGTATGACATAACTTCTACGGAACAGGTCACTTTGCAGTCTGCTTAG 3573 0.431 MEAWDGPALLLFSDGKTVGACLDRNGLRPARYWRTSDNMVYVASEVGVVPMDESKVILKGRLGPGMMITVDLLGGQVYENMEVKKRVALSNPYGDWVKENLRSLKSGNFLSSSVMENDTVLRNQQAFGYSSEDVQMVIESMASQGKEPTFCMGDDIPLAALSQKPHMLFDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRRNILEIGPENASQVILSSPVLNEGDLESLLKDSHLKPQVLHTFFDITKGIDGSLEKALNKLCDAADEAVRNGSQLLILSDRSEALEPTHPAIPILLAVGTVHQHLIQNGLRMSASIIADTSQCFSTHQFACLVGYGASAVCPYLALETCRQWRLSNKTVNLMKNGKMPTVSIEQAQKNYCKAVKAGLLKILSKMGISLLSSYCGAQIFEIYGLGKEVVDLAFSGSVSKIGGLTFDELARETLSFWVKAFSEDTAKRLENFGFIQFRPGGEYHANNPEMSKLLHKAVRQKSQNSFSVYQQYLANRPVNVLRDLLEFKSDRAPIPVGRVEPASSIVKRFCTGGMSLGAISRETHEAIAIAMNRLGGKSNSGEGGEDPIRWKPLTDVVDGYSSTLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLANADQLEIKIAQGAKPGEGGQLPGKKVSMYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPRAKVSVKLVAEAGIGTVASGVAKGNADIIQISGHDGGTGASPISSIKHAGGPWELGLTESHQTLVANGLRERVILRVDGGFRSGVDVMMAAIMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNLFLYVAEEVRGTLAQLGYEKLDDIIGQTDLLRPRDISLVKTQHLDLSYILSSVGLPKWSSTEIRNQEPHTNGPVLDDGLLADAEIADAIENEKAVSKTVNIYNVDRAVCGRIAGVIAKKYGDTGFAGQLNITFTGSAGQSFGCFLTPGMNIRLVGEANDYVGKGMAGGELVVTPVDKTGFQPEDAAIVGNTCLYGATGGQVFVRGKAGERFAVRNSLAEAVVEGTGDHCCEYMTGGCVVILGKVGRNVAAGMTGGLAYILDEDNTLIPKINREIVKIQRVSAPVGQMQLKKLIEAHVEKTGSNKGDAILKDWDKYLSLFWQLVPPSEEDTPEANAKYDITSTEQVTLQSA* 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1821 1190 Gene3D Aldolase class I 100 466 IPR013785 -
Psa3g1821 1190 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 100 IPR029055 -
Psa3g1821 1190 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 1 210 IPR029055 -
Psa3g1821 1190 Gene3D - 896 1171 IPR036485 GO:0016491
Psa3g1821 1190 PANTHER FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 1, CHLOROPLASTIC/MITOCHONDRIAL 1 1189 - -
Psa3g1821 1190 SUPERFAMILY FMN-linked oxidoreductases 117 896 - -
Psa3g1821 1190 CDD gltB_C 915 1165 IPR002489 GO:0016491
Psa3g1821 1190 Pfam Glutamate synthase central domain 123 415 IPR006982 GO:0006807|GO:0015930
Psa3g1821 1190 SUPERFAMILY Alpha subunit of glutamate synthase, C-terminal domain 908 1171 IPR036485 GO:0016491
Psa3g1821 1190 PANTHER FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE 1 1189 - -
Psa3g1821 1190 Pfam Conserved region in glutamate synthase 474 858 IPR002932 GO:0006537|GO:0015930|GO:0016638
Psa3g1821 1190 Pfam GXGXG motif 940 1122 IPR002489 GO:0016491
Psa3g1821 1190 CDD GltS_FMN 477 872 IPR002932 GO:0006537|GO:0015930|GO:0016638
Psa3g1821 1190 Gene3D Aldolase class I 148 874 IPR013785 -
Psa3g1821 1190 Pfam Glutamine amidotransferases class-II 1 96 IPR017932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1821 Psa-Chr3 163462543 163480636 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1821 K00284 - gmx:548016 2235.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1821 3 163462543 163480636 Psa3g1821 3 163462543 163480636 ECH