Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1815 ATGGACGCAACAATCGGAAGCCTCATTGAATCCATAGGAAACTTCTTCACCGGCGGCGATCAGATCCCCTGGTGCGACCGTGATGTTATCTCTGGCTGTGAAAGAGAAGTTGCAGAAGCTTCTGATGGTGACTCTGATGAGCGGAAGAATGAGAGCATAATGAGGTTGTCATGGGCACTTGTTCATTCAAGGCAAAAAGAAGACATTCAGCGCGGGGTCGCCATGCTTGAAACTTCTTTGGGCAATGATAAAAGTCCTTTACATCAAAGAGAGAAGCTTTATCTTCTTGCTGTTGGGTACTACAGGACTAATGATTATGCTAGGAGTCGGCAGCTTCTGGAGCAATGTTTGGAGATTGCACCTGATTGGAGGCAGGCATTGTCGCTCAAGAAAGCAGTCGAAGATCGAATTGCAAAGGATGGTGTAATAGGAATTGGCATCACTGCAACAGTTGTGGGACTTGTAGTTGGTGGCGTTGCTACAGCATTGGCACGAAGGAATTGA 504 0.4683 MDATIGSLIESIGNFFTGGDQIPWCDRDVISGCEREVAEASDGDSDERKNESIMRLSWALVHSRQKEDIQRGVAMLETSLGNDKSPLHQREKLYLLAVGYYRTNDYARSRQLLEQCLEIAPDWRQALSLKKAVEDRIAKDGVIGIGITATVVGLVVGGVATALARRN* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1815 167 Pfam Fis1 C-terminal tetratricopeptide repeat 90 142 IPR028061 -
Psa3g1815 167 Pfam Fis1 N-terminal tetratricopeptide repeat 51 80 IPR028058 -
Psa3g1815 167 PANTHER MITOCHONDRIAL FISSION 1 PROTEIN B 1 166 - -
Psa3g1815 167 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11 1 166 IPR016543 GO:0000266
Psa3g1815 167 SUPERFAMILY TPR-like 10 166 IPR011990 GO:0005515
Psa3g1815 167 PIRSF TPR_repeat_11_Fis1 4 167 IPR016543 GO:0000266
Psa3g1815 167 Gene3D Tetratricopeptide repeat domain 24 166 IPR011990 GO:0005515
Psa3g1815 167 CDD Fis1 23 141 IPR033745 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1815 Psa-Chr3 161545715 161554220 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1815 K17969 - gmx:100785425 282.337