Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1801 ATGAACTCCACGGTAATTACCGCTGCAATTTTCCTCGCTCTCTTCGCTATCACCTTCACCTTATTCAACCCACTAAACCTCTTTACACCGCTTCCCATTCCTGGATCCAAGGATCACCTCCATGCTGCTCACTTGCTCCACGTCACCGGAGCCGTCGGTCCGGAGAGTCTTGTTTTTGATAGTCTCGGTGATGGACCCTACACCGGAGTCGCCGATGGTCGGATTCTGAAATGGGAAGGAGAGGAACGTGGTTGGACTCAATTTGCCGTCACAAGTTCCAATAGGTCGGACTGTGTACGTCCATTTGCACCAGAATTAGAGCATGTTTGTGGGAGGCCACTAGGACTGAAGTTTGATAAGAAAAATGGAGATCTGTACATTGCTGATTCCTACCTCGGCCTCAAAGTAGTAGGACCTGCAGGGGGTTTGGCCGCCGAAGTAGCAACAGAAGCTGAAGGACAGCCCTTTCGCTTCACCAATGACATGGACATCAGTGAAGATGAAGATGTGATTTACTTCACTGATTCGAGCACAGTATATCAGAGAAGGCAATTTATGCTTATACTTCTTAGTGGAGACAAGACTGGGCGGTTAATGAAATACGACAAGTCGACAAAAGAAGTGAAGGTCTTATTACGCGACCTTGCTTTTCCCAACGGTGTTGCTTTAAGCAAAGATGGTTCATTTCTTCTGGTAGCTGAAACCTCGACTCACAGGATTCTGAGGCTTTGGCTTCATGGACCTAAGTCTGGCCAAGTCGATACTTTTGCTATTGTTCCAGGTTTTCCGGACAATATAAGGAGAAATTCAGAAGGGCAGTTCTGGGTAGCTTTACATGCCAAAGAAACTCCCTTTGCAAGGTGGATTGCTTCCAATTTATGGGCTGGTAAAGCATTGTTAAAGCTTGGAAATTTCAAGCAGTTGCATGCGTCGGTGGCGAAGAAGCCTCATGCTGCAGCTATAAAGTTGAGTGATGAAGGGGAAATATTAGAAGTCTTGGAAGATTGTGAAGGGAAGACGTTGAAGTTCATCAGTGAAGTGGAAGAGAAAGATGGAAAACTTTGGATTGCATCAGTGTTAATGCCTTATATTGGTGTTTATAGTTTGTGA 1110 0.4559 MNSTVITAAIFLALFAITFTLFNPLNLFTPLPIPGSKDHLHAAHLLHVTGAVGPESLVFDSLGDGPYTGVADGRILKWEGEERGWTQFAVTSSNRSDCVRPFAPELEHVCGRPLGLKFDKKNGDLYIADSYLGLKVVGPAGGLAAEVATEAEGQPFRFTNDMDISEDEDVIYFTDSSTVYQRRQFMLILLSGDKTGRLMKYDKSTKEVKVLLRDLAFPNGVALSKDGSFLLVAETSTHRILRLWLHGPKSGQVDTFAIVPGFPDNIRRNSEGQFWVALHAKETPFARWIASNLWAGKALLKLGNFKQLHASVAKKPHAAAIKLSDEGEILEVLEDCEGKTLKFISEVEEKDGKLWIASVLMPYIGVYSL* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1801 369 Pfam Strictosidine synthase 160 247 IPR018119 GO:0009058|GO:0016844
Psa3g1801 369 PANTHER STRICTOSIDINE SYNTHASE-RELATED 3 367 - -
Psa3g1801 369 Gene3D - 37 369 IPR011042 -
Psa3g1801 369 SUPERFAMILY Calcium-dependent phosphotriesterase 33 367 - -
Psa3g1801 369 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 10 3 367 - -
Psa3g1801 369 Pfam Strictosidine synthase-like, N-terminal 38 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1801 Psa-Chr3 159231938 159234660 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1801 - - gmx:100788609 608.216