Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1799 ATGGCGATGAGGCCACAACTGCATCATCTCACGGTGGCCATGGTGACAGTTGTAGTCACTGCATGGTTAGCATACAATCACGGCAATAACCCCCAAACATCAGTAGCCTTCGGAGTTTCCGATGTGTACGAGATGGTTCCGGTTGAAAACTGTGGTGCTGTTGGACCAGAGAGTTTAGCTTTCGATGCTCACGGGGAAGGACCTTACGCAGGAGTTTCTGATGGAAGAATTATCAAATGGGACCGTCTTGAAAATCATTGGGTGGACTTTGCGGTGACTTCTTCAAACAGAGGTGATGATGTTGAAGATTGTGGAGGACCATATAAAGAACATTCCAAGAAAGAGCACATATGTGGACGCCCACTTGGGCTTTGCTTTAACATAGCATCAGGCCAACTCTATGTTGCTGATGCATACATGGGCCTAGTTGTTATTGAGCCCAATGGTGGCACTGCTACAAAACTCATATCACATGCAGTAGAAGATCAACCATTGAGTTTTACAAACGGTTTGGATATTGATCAAAAAACTGGAGCAGTTTACTTCACCACTAGCAGTACTAAATATGAAAGAAGGAATCACGTGTCTTTGATTCTAAGTGGAGACAAATCAGGAAGACTAATAAAATATGAACCAGAAACCGAAAAAATAACCGTTGTTCTAAACAATCTCACATTTCCAAATGGAGTAGCATTAAGCAAAGATAGTAATTATATTCTAATAGTAGAGACAACAAATTGTAGAATACTAAGATATTGGTTACAAACACCAAAAGCTGGAACATTGGAAGTCTTTGCTAACCTACCCGGTTTTGGAGACAACATAAAACGGAGTCCAAGAGGTGGATTTTGGGTTGGAATTCACTCGAAAAGAGAGAACTTTATCAAATGGATTCTATCATATCCATGGATAGGAAAAGGGTTGGTTATGCTTCCTTTGGACATGACAAAAACTTATTCATATTTGGCTAAGATAAAAGGGAGTAGTGGAATGGCAATAAGGCTAAGTGAGGAGGGCGATGTTTTGGAAGTTGTTGAAGATGATAGAAGTGGAAATAGAAAGTCTATTAGTGATGCTGAGGAAAGAGATGGAGTATTATGGATAGGATCTGTTGATGCACCTTTTGCTATTAAGTATAATACTCCTGTGGCACAAGAATAA 1161 0.4031 MAMRPQLHHLTVAMVTVVVTAWLAYNHGNNPQTSVAFGVSDVYEMVPVENCGAVGPESLAFDAHGEGPYAGVSDGRIIKWDRLENHWVDFAVTSSNRGDDVEDCGGPYKEHSKKEHICGRPLGLCFNIASGQLYVADAYMGLVVIEPNGGTATKLISHAVEDQPLSFTNGLDIDQKTGAVYFTTSSTKYERRNHVSLILSGDKSGRLIKYEPETEKITVVLNNLTFPNGVALSKDSNYILIVETTNCRILRYWLQTPKAGTLEVFANLPGFGDNIKRSPRGGFWVGIHSKRENFIKWILSYPWIGKGLVMLPLDMTKTYSYLAKIKGSSGMAIRLSEEGDVLEVVEDDRSGNRKSISDAEERDGVLWIGSVDAPFAIKYNTPVAQE* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1799 386 PANTHER STRICTOSIDINE SYNTHASE-RELATED 11 376 - -
Psa3g1799 386 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 2 11 376 - -
Psa3g1799 386 Pfam Strictosidine synthase-like, N-terminal 52 80 - -
Psa3g1799 386 Pfam Strictosidine synthase 169 256 IPR018119 GO:0009058|GO:0016844
Psa3g1799 386 Gene3D - 40 384 IPR011042 -
Psa3g1799 386 SUPERFAMILY Calcium-dependent phosphotriesterase 51 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1799 Psa-Chr3 159131600 159146564 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1799 - - mtr:MTR_7g090320 575.474