Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1798 ATGGCCGTTATGAGTGCTTTCAGGACTCTATCTTCCAAATCGAGGTCACTCACGACGGCACTCGTTAAATCATGCCGGTCGGCGTCGTACTCCTCCGCGGCGGTGGTGGCTGATGACAGTTTTGAGAGCGGCACGTATTTGAAAGATTATGCTGATTATAGAAGATCTCTGTACGGTCAGATTACGCATAAAGCTCTTCTCGTTGATGCCGTTGGTACTCTTGTTCTTCCTTCTCAACCTATGGCTCAGATATATAGAAAAATTGGGGAGAAATATGGTGTGGAGTATTCAGAGGAAGAAATTTTGCATAGATACAGAAGAGCTTATAGTCAACCTTGGGGTAAATCTCGTCTCAGATATGTTAAAGATGGTAGACCGTTCTGGCAATACATTGTTAGTAATTCTACCGGCTGTGATGATTCTCAATACTTTGAAGAACTTTATAACTACTATGTCACAGACAAGGCATGGCACCTATGTGACCCTAATGCAGGAGAAGTGTTCAAAGCTCTTAGAAAATCAGGTGTAAAATTGGCCGTTGTGTCAAATTTTGACACCCGGTTAAGACCTCTTCTGCGGGCATTAAACTGTGATGATTGGTTTGATGCTGTAGCAGTATCAGCTGAGGTTGCAGCCGAGAAACCAAATCCAACTATATTTCTCAAAGCATGTGAACTATTGGACGTAAAACCGGAGGATGCTGTTCATGTCGGGGATGACCGCCGCAATGATGTATGGGGTGCTAGAGATGCAGGCTGTGATGCCTGGCTTTGGGGAAGTGATGTTCACTCTTTTAAAGAGGTAGCACAGAGGATCGGGGTCCAGGTCTGA 831 0.4477 MAVMSAFRTLSSKSRSLTTALVKSCRSASYSSAAVVADDSFESGTYLKDYADYRRSLYGQITHKALLVDAVGTLVLPSQPMAQIYRKIGEKYGVEYSEEEILHRYRRAYSQPWGKSRLRYVKDGRPFWQYIVSNSTGCDDSQYFEELYNYYVTDKAWHLCDPNAGEVFKALRKSGVKLAVVSNFDTRLRPLLRALNCDDWFDAVAVSAEVAAEKPNPTIFLKACELLDVKPEDAVHVGDDRRNDVWGARDAGCDAWLWGSDVHSFKEVAQRIGVQV* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1798 276 Gene3D - 79 152 IPR044924 -
Psa3g1798 276 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 14 276 - -
Psa3g1798 276 SUPERFAMILY HAD-like 64 267 IPR036412 -
Psa3g1798 276 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 64 258 - -
Psa3g1798 276 Pfam Haloacid dehalogenase-like hydrolase 72 255 IPR041492 -
Psa3g1798 276 SFLD Haloacid Dehalogenase 64 258 - -
Psa3g1798 276 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 63 74 IPR006439 -
Psa3g1798 276 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 171 184 IPR006439 -
Psa3g1798 276 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 201 217 IPR006439 -
Psa3g1798 276 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 219 239 IPR006439 -
Psa3g1798 276 Gene3D - 68 260 IPR023214 -
Psa3g1798 276 TIGRFAM DREG-2: HAD hydrolase, REG-2-like, family IA 64 257 IPR011949 -
Psa3g1798 276 CDD HAD_dREG-2_like 164 275 - -
Psa3g1798 276 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 155 254 IPR006439 -
Psa3g1798 276 TIGRFAM HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 172 252 IPR006439 -
Psa3g1798 276 PANTHER - 14 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1798 Psa-Chr3 158993455 158996608 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1798 - - adu:107492671 444.506