Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1782 ATGGATCATATTAGTAATGAAGCTAGGGTTGACCGTTTTCCAATTGGTCCTTCAGACATTCTTGGCAAAACAATTGCTTTCAGGGTTCTATTCTGCAAATCCATGTCCCATTTAATGTATCAAATATTTCATCTTTTGTTAGGATTTTTGTATAGGTTTAAAGGGTTGTTGAAATTGAAACCCTTTTTATCCTGGTTTCATCCAAGAAACCCACAAGGGATATTAGCAATTATCACAATAGTTGCTATCTTGTTGAAACGTTACACAAATGTTAAGGTTAGAGCTGAAATGGCCTATAGGAGGAAGTTTTGGAGAAATATGATGAGAAGTGCTTTGACTTATGATGAATGGGCTCATGGAGCTAAGATGCTTGATAAATTGACACCAAAGATGAATGAGTCAGATCTTTATGATGTTGAGTTGGTTAGGAATAAGCTTCAAGAGCTTCGTCATAGGCGGCACGAGGGGTCGCTTAGAGATATTATGTTTTGTATGCGGGCGGATCTTGTTAGGAATTTGGGTAATATGTGTAACCCGGAATTGCATAAGGGTAGGCTTCAAGTTCCTAGGTTGATTAAGGAGTATCTTGACGAGGTAACGACGCAGTTGAGAATGGTTTGTGAGTCGGATTCGGAGGAGTTGTCATTGGAAGAAAAGGTTACTTTTATGCATGAAACTAGACATGCTTTTGGGAGAACGGCTTTGTTGTTAAGTGGTGGTGCTTCTCTTGGAGCTTTTCATGTTGGGGTAGTTAACACATTGGTGAAACATAAGCTCTTGCCTAGGATAGTTGCTGGTTCGAGCGTTGGATCTATTATGTGTGCTATTGCTGCAACTAGATCGTGGCCGGAGCTTCAGAGTTTTTTCGAGGATTCGTTGCATTCGTTGCAGTTTTTCGATCAAATGGGTGGGATTTTTGCGGTTGTCAAGAGGGTCGCAACGCGGGGGGCTGTTCATGAGATCAGGCAGTTGCAAATGCTGTTGAGGCATTTAACAAACAACCTAACATTTCAAGAAGCTTATGATATGACAGGTAGAGTTCTTGGAATTACGGTTTGCTCCCCGAGGAAACATGAACCTCCTAGATGTCTTAACTACTTGACGTCACCTCACGTCGTTATATGGAGTGCGGTAACTGCTTCTTGCGCCTTCCCCGGCCTTTTTGAAGCTCAAGAATTGATGGCAAAGAATAGAAGTGGAGATATTGTTCCTTATCATCCTCCTTTTAATCTAGGCCCCGAAGAAGGCTCCACACCATCACGCCGGTGGAGGGATGGTAGCTTAGAGATTGATTTACCTATGATGCAGTTAAAAGAGCTATTCAATGTCAATCATTTTATAGTCAGTCAAGCCAACCCTCACATTGCACCATTGTTGAGATTGAAAGAGGTTGTAAGAACTTATGGAGGCAATTTTGCTGCCAAGCTTGCCCATCTTGTGGTGATGGAGGTGAAACATAGGTGTAATCAAGTACTGGAACTTGGCTTTCCCTTAGGTGGACTTGCCAAACTATTTGCTCAAGAATGGGAGGGTGATGTCACTATTGTTATGCCCGCGACCCTTGCTCAGTACTCAAAAATTATACAGAACCCTTCTTATGGAGAGCTTCAAAAAGCAGCCAACCAAGGGAGAAGATGTAGCTGGGAGAAGCTTTCAGCCATAAAAGCAAATTGTGAAATTGAGCTTGCTCTTGATGAATCTGTGGCAATTCTCAATCATATGAGAAAACTAAAAAGAATTGCCGAGAGAACTTCTGCTTCTGCGTCTCATGGTTTGTCAAGTACTGTCAGATTCAGTGGTTCAAGAAGAATTCCTTCATGGAATTGCATGGCACGGGAGAATTCAACAGGCTCTCTTGAAGACCTTACAGATGTTACTTCCTCGTTGCATCAAGGCATTGGCAGTGACTCTGAAAATGTTGATTTGACTTCTTGGACCAGATCTGGTGGCCCTTTGATGAGAACCGCTTCGGCAAATATGTTCGTCGACTTCCTCCAAAACTTAGAGGGTGTTGATACTGATGTAAACAGAGGCCCCGCGGGTCATTCTAATCCTCGTGATTTTCAGTATCATAATTTCAGACTCACGGGACCAGATAGGAACTCAGAATCTGAGCAGAAGGAAATTGACAGCAGGGTTGTTAACGGATCTAGCTTACTGATAACGGAAGGTGATATTTTGCAGACCGAAAAGATTCATAATGGGATTGTGTTAAATGTTGTCAAGAAAGAAACGTTAGCACCTTCAAATAGGTGTCATGATCTTGGAAATTACAACAATGAAGTTGTGGAGTGTGACCAAATTGACTGTTCAGGGAAGGAAATGGATACTGGTAGCTCTGATTCTGACTATGAAAATGATAAATCCACACCAGCTTTGAGCATGGATCAAAGCATTGTAGATAGTTAG 2409 0.4193 MDHISNEARVDRFPIGPSDILGKTIAFRVLFCKSMSHLMYQIFHLLLGFLYRFKGLLKLKPFLSWFHPRNPQGILAIITIVAILLKRYTNVKVRAEMAYRRKFWRNMMRSALTYDEWAHGAKMLDKLTPKMNESDLYDVELVRNKLQELRHRRHEGSLRDIMFCMRADLVRNLGNMCNPELHKGRLQVPRLIKEYLDEVTTQLRMVCESDSEELSLEEKVTFMHETRHAFGRTALLLSGGASLGAFHVGVVNTLVKHKLLPRIVAGSSVGSIMCAIAATRSWPELQSFFEDSLHSLQFFDQMGGIFAVVKRVATRGAVHEIRQLQMLLRHLTNNLTFQEAYDMTGRVLGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKNRSGDIVPYHPPFNLGPEEGSTPSRRWRDGSLEIDLPMMQLKELFNVNHFIVSQANPHIAPLLRLKEVVRTYGGNFAAKLAHLVVMEVKHRCNQVLELGFPLGGLAKLFAQEWEGDVTIVMPATLAQYSKIIQNPSYGELQKAANQGRRCSWEKLSAIKANCEIELALDESVAILNHMRKLKRIAERTSASASHGLSSTVRFSGSRRIPSWNCMARENSTGSLEDLTDVTSSLHQGIGSDSENVDLTSWTRSGGPLMRTASANMFVDFLQNLEGVDTDVNRGPAGHSNPRDFQYHNFRLTGPDRNSESEQKEIDSRVVNGSSLLITEGDILQTEKIHNGIVLNVVKKETLAPSNRCHDLGNYNNEVVECDQIDCSGKEMDTGSSDSDYENDKSTPALSMDQSIVDS* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1782 802 CDD Pat_SDP1-like 165 572 - -
Psa3g1782 802 Gene3D Cytosolic phospholipase A2 catalytic domain 309 495 - -
Psa3g1782 802 MobiDBLite consensus disorder prediction 774 802 - -
Psa3g1782 802 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 235 438 IPR002641 GO:0006629
Psa3g1782 802 Pfam Domain of unknown function (DUF3336) 97 228 IPR021771 GO:0004806|GO:0006629
Psa3g1782 802 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 1 693 - -
Psa3g1782 802 Pfam Patatin-like phospholipase 235 427 IPR002641 GO:0006629
Psa3g1782 802 MobiDBLite consensus disorder prediction 784 802 - -
Psa3g1782 802 SUPERFAMILY FabD/lysophospholipase-like 231 575 IPR016035 -
Psa3g1782 802 Gene3D Cytosolic phospholipase A2 catalytic domain 231 308 - -
Psa3g1782 802 PANTHER TRIACYLGLYCEROL LIPASE-RELATED 1 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1782 Psa-Chr3 157987250 157991305 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1782 4 779 Acyl Lipid Metabolism Gene Families AT5G04040 73.500 0.0 1197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1782 K14674 - gmx:100791261 1289.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1782 3 157987250 157991305 Psa3g1782 3 157987250 157991305 ECH