Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1781 ATGATTAATCAAAAAGCTGAGATTGAATCTCAGCCTCTGATTGAAAACATAGGAAAATTGGAATCCAAGAAGAAACTAAAGAAAGTTAGATCAATGAAAAAGCTTCAGAGATTGTCAAGCAGAGGAAGAGGAAGAAAACCACAGTATGATCTTCATAGCCTCTCAACTATTTCATCTGTTGACTCAGAAACTTCACAGCATCAAACCCCAATTGAGGTCACAGATTCATCACCCAATTATATGAAAGCCACAAGTAGCTCTCATGCAAAGGATAGTTTTCAGATTAAACAAAGACTTGTTCGAAACAAGACTTTAACAAGAATGAATACTTTGAAACTGAAGAGAAGTTTGACTAGAAAGTTGTCCGGAAAGACTGAACAAAAGAGGAAGCTGAAGTCATCAAGATCGATCAAGCTCGCAGCTGTCAAGGGATCTAAATCAACAACAAGGGTAAATTCTGAATCTATTAATGGAATTGATGGCGAGAATGGGGAAAGTACGAGTGATGCTGGTAATAAGACTCGGAGAGTTCTTACTAGAAGATTAAGCTTGAAACCGATGAGGATTTCGGCAAAACAAAACAATTGCAAATCGAAGAATTCTTCGGTGGACTCGAGTTTGCTTAAAGCTACGTGTTCTTCCATTATTAAGGATTCCCATTTCCCTGATCGTATTGAACACCCGCAAGAGGGAAGTGGTTCTCAAGGAGTATCGGCTGTTAGGGTTTGTCCGTATACTTACTGTTCACTTCATGGTCATCGTCACGGTGATTTGCCTCCGTTGAAGCGGTTTGTATCGATGAGGAGACGTCAGTTGAAGACGCAAAAGTCTGTGAAGAAGGACGGGAGATCAAAGCAAATTGGTAATGCAAGGAAAGCCACTCAGAAAACCAAAACTGTTCACAATGAAGATGGCGACTCTCACTTTCAGAATGAGAAAAATGTGGCAAGAGAATCATCGCCTTTTAAGCCTCGCGATACTCCACCATCCACGGTTAATGAAGGTGATACTTCAACCAAAGGCAAAAATATGGAGCCAGATTATGAAGTGTTGCAGAAGAGTTTTGAACAAGATGTTACTACTACTGGCGTGGCATATGCGGTGCAGGAAAGAGATCAGAAATATATAAAAAAGTGGCATTTGATGTATAAGCATGCAGTATTAAGTAACACAGGTAAATGTGAAAATAAGCTTCCCTTGGTTGGGAAAGAAAAAGAAGGTAGAGAGGAAGATAATGAAGGAAACAACTCTTCTTGTCACAATTGTAGTGAAACAGATTCAGATATGGATGATGAAAAGAAGAATGTAATTGAGCTGGTGCAAAAAGCATTTGATGAAATTCTTCTCCCTGAAGTTGAAGACTTTTCCTCTGACAATCATTTAAAATCTAGAGGCAATGAAACTGATGAGCAACTCTTAGAAAAGAGTGAAGGTAAGATTGAAGATAGGAATACCACAACTTTTGCAGAATCTCCTAAAGAAGTACAGAAGATGGAGAACAAAACAAAAAGCTGGAGCCGCCTCAAAAGGGTAATCCTCTTGAAAAGGTTTGTAAAGGCATTGGATAAGGTTAGAAACATCAATCCAAGAAGACCAAAACAATCTTCTTCAGATGTCAACTTTGAAGCGGAAAATGTTGTTCTTAACCGCCAAACAGCAGAAGAGAGGAGAAAGTCGGAGGAGTGGATGCTTGACTATGCACTTCAAAAGGTTATTTCTAAACTCGCACCTGCTCAGAGACAAAGAGTGAGGCTTTTAGTAGAAGCTTTTGAAACGGTTCTGCCATTTCAAGATGCTGAAAATGAACTGCAGCCTTCCGCGACAGTGGAGTCTCAGGAAAATCCAATTGAATCACTGGATGCTTCCACAAATCATAGCAAGGAAGAAGTAAACGAAGGAAGGGATTCTGTTTACTCTGCTAAGACATTGCTTGGAAAAGTTTCATGTTCTAATGACAGTACTATAGAATTTTCCGATAAAGCTAGTGAAAATCCAATGCATGAACTTTGCAATCCTTTTGAACCAGTGGAGAATATATGCAATTGTCAGGAGGAGGCTCCAACCAATCGAATAGTCGATGAAGTTCCAGAAGATTTGGTTTCAGATTTGAGTACAGAAAATGCGAGTATCAGATCTGAGTCGCCTGAGAAATATTGTGAAACCAAGAATGTAATTGGTGATAATAGTGAACAATTTTCTTTGACTAAAAGCTTAGTCCTAAATGGTCTTGTGAGATCTCTGAAATCTAATTTGGTTGGCCCAGAAGCACCGTCCAACCTATTAGATGAACCAACAAGAGACAGAAAAGTTATGATTGAAAAAGATCAGCCGGGAACATCCGAAGCTCCTACAAGTGCTGTTGTAGAATCTGAGACTCCGGTAGAGAAACAAGGCAACACAGGGCTATGGTTCATGGTGTATAAGCACATGGTATCAGATATAACTGAAAACAATCCCAAGACATTAACTGATGGGCCAGATGAGAAAGTGTCAGAGTATGAAGGTAGCATAACAAGAGAAAATTCTGTCTCTTATGAAAGTACACCTGTTAGTAGTCCAGATATGCACTTCAAGGATCATGCTGTAGCAGATGCCGAAGTTGAACTTCGACAGATTGAAGCCATCAAGATGGTAGAAGAAGCAATAGATTCCATCCTTCCAGACAGACAGCCACTTTCTGACAATAACACAATTGACAGAACTGAAAAAGTGTACAGTCAAGGCTTGAACCAAAAAGAAGAAACGATGGAATCTGGGAATGGAATAGCCAAGCAACAAAAAGAAGAATCATTATCAAAGGAAGGAGACAGACCAAAACAGAAATTGTCTAGGAACTGGAGCAATCTTAAAAAAGTGATAATGCTTAGGAGATTCATCAAGGCATTGGAAAAAGTTAGGAAATTTAACCCAAGAGGGCCTAGATATCTACCATTAGAACCTGATTCAGAAGCTGAAAAAGTTGAATTGAGGCGTCAAGATATGGCAGAAAGAAAAGGCACAGAAGAATGGATGCTTGATTATGCACTTAGACAGGTTGTGTCCAAATTAACTCCAGTTAGGAAGAGAAAAGTGGAGTTGTTAGTCGAAGCTTTCGAGACAGTCGTGCCAACCGTAAAAAATTGA 3123 0.3945 MINQKAEIESQPLIENIGKLESKKKLKKVRSMKKLQRLSSRGRGRKPQYDLHSLSTISSVDSETSQHQTPIEVTDSSPNYMKATSSSHAKDSFQIKQRLVRNKTLTRMNTLKLKRSLTRKLSGKTEQKRKLKSSRSIKLAAVKGSKSTTRVNSESINGIDGENGESTSDAGNKTRRVLTRRLSLKPMRISAKQNNCKSKNSSVDSSLLKATCSSIIKDSHFPDRIEHPQEGSGSQGVSAVRVCPYTYCSLHGHRHGDLPPLKRFVSMRRRQLKTQKSVKKDGRSKQIGNARKATQKTKTVHNEDGDSHFQNEKNVARESSPFKPRDTPPSTVNEGDTSTKGKNMEPDYEVLQKSFEQDVTTTGVAYAVQERDQKYIKKWHLMYKHAVLSNTGKCENKLPLVGKEKEGREEDNEGNNSSCHNCSETDSDMDDEKKNVIELVQKAFDEILLPEVEDFSSDNHLKSRGNETDEQLLEKSEGKIEDRNTTTFAESPKEVQKMENKTKSWSRLKRVILLKRFVKALDKVRNINPRRPKQSSSDVNFEAENVVLNRQTAEERRKSEEWMLDYALQKVISKLAPAQRQRVRLLVEAFETVLPFQDAENELQPSATVESQENPIESLDASTNHSKEEVNEGRDSVYSAKTLLGKVSCSNDSTIEFSDKASENPMHELCNPFEPVENICNCQEEAPTNRIVDEVPEDLVSDLSTENASIRSESPEKYCETKNVIGDNSEQFSLTKSLVLNGLVRSLKSNLVGPEAPSNLLDEPTRDRKVMIEKDQPGTSEAPTSAVVESETPVEKQGNTGLWFMVYKHMVSDITENNPKTLTDGPDEKVSEYEGSITRENSVSYESTPVSSPDMHFKDHAVADAEVELRQIEAIKMVEEAIDSILPDRQPLSDNNTIDRTEKVYSQGLNQKEETMESGNGIAKQQKEESLSKEGDRPKQKLSRNWSNLKKVIMLRRFIKALEKVRKFNPRGPRYLPLEPDSEAEKVELRRQDMAERKGTEEWMLDYALRQVVSKLTPVRKRKVELLVEAFETVVPTVKN* 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1781 1040 MobiDBLite consensus disorder prediction 927 942 - -
Psa3g1781 1040 MobiDBLite consensus disorder prediction 907 942 - -
Psa3g1781 1040 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 679 1038 IPR044681 GO:0005516
Psa3g1781 1040 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 14 663 IPR044681 GO:0005516
Psa3g1781 1040 SMART CaM_binding_2 923 1036 IPR012417 GO:0005516
Psa3g1781 1040 SMART CaM_binding_2 476 595 IPR012417 GO:0005516
Psa3g1781 1040 MobiDBLite consensus disorder prediction 296 313 - -
Psa3g1781 1040 MobiDBLite consensus disorder prediction 51 79 - -
Psa3g1781 1040 MobiDBLite consensus disorder prediction 403 430 - -
Psa3g1781 1040 MobiDBLite consensus disorder prediction 324 339 - -
Psa3g1781 1040 Pfam Plant calmodulin-binding domain 933 1036 IPR012417 GO:0005516
Psa3g1781 1040 Pfam Plant calmodulin-binding domain 493 595 IPR012417 GO:0005516
Psa3g1781 1040 MobiDBLite consensus disorder prediction 778 794 - -
Psa3g1781 1040 PANTHER CALMODULIN BINDING PROTEIN PICBP 14 663 - -
Psa3g1781 1040 PANTHER CALMODULIN BINDING PROTEIN PICBP 679 1038 - -
Psa3g1781 1040 MobiDBLite consensus disorder prediction 907 926 - -
Psa3g1781 1040 MobiDBLite consensus disorder prediction 24 41 - -
Psa3g1781 1040 MobiDBLite consensus disorder prediction 24 79 - -
Psa3g1781 1040 MobiDBLite consensus disorder prediction 270 344 - -
Psa3g1781 1040 MobiDBLite consensus disorder prediction 773 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1781 Psa-Chr3 157957506 157962788 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1781 377 631 Calmodulin-binding Proteins AT5G04020 32.075 6.19e-22 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1781 - - gmx:100820346 1052.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1781 3 157957506 157962788 Psa3g1781 3 157957506 157962788 ECH