Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1780 ATGGCTCAATTGCTATCATCTTCTTCTTCCTTGAGTTTCTCCGCTATAAATAAACCGAATTTAAAACCTTTTAACCAATGCTCAGCATCATTTTCTAACAGAGTTGGTTGTAATTATTCTTCCAGAACTCGATTTAGGCGTCTTTTCTTGCGAGAACAGAAGCCAAGTAAACGTTTCGCAGTTGTAAATGCTGCGACCGTTTCAACCGGGCAGGAAACTCCGGTTCAAACTAATTCCGGTGAGCCTTTTAAACCGAAGAGAGTCATGGTCATTGGTGGAGATGGATACTGTGGTTGGGCAACTGCCCTCCATCTTTCTAACAAAGGTTACGATGTTGCCATTGTTGATAACCTTGTTCGACGCCTTTTCGATCACCAGCTTGGTTTGGATTCTTTGACGCCGATTTCCTCCATTCAGGATCGTCTTCAGTGTTGGAAATCGCTCACCGGGAAAAGTATTGAGCTATATGTTGGTGATATATGTGAGTTTGAGTTCTTATCTGAAACGTTCAGGTCTTATGAGCCTGATGCTGTTGTTCATTTCGGGGAACAGCGATCTGCTCCTTACTCTATGATAGATCGGTCGAGAGCTGTGTATACTCAGCAAAACAATGTTGTCGGGACACTGAACGTGCTCTTCGCTATAAAAGAGTATAAAGAGGATTGTCATCTAGTTAAGCTTGGGACAATGGGTGAATACGGGACTCCGAATATTGATATTGAGGAAGGTTATATTACCATTACTCACAATGGAAGAACAGACACTTTGCCGTATCCGAAACAAGCTAGCTCGTTCTATCATTTAAGCAAGGTGCATGATTCACATAACATAGCTTTCACTTGTAAAGCTTGGGGGATTCGGGCGACGGATCTGAATCAAGGAGTAGTATATGGAGTAAAAACAGACGAGACTGCAATGCATGAAGAGCTGTGTAATAGGTTTGATTACGATGCAATATTTGGAACTGCGTTGAATCGGTTTTGTGTTCAGGCTGCTGTTGGTCATCCACTCACTGTATATGGTAAAGGAGGCCAGACTAGGGCTTTCCTTGACATAAGAGATACAGTCCAATGTGTTGAGCTTGCGATTGCGAACCCGGCCAACCCTGGAGAATTTCGAGTCTTCAATCAATTTACGGAACAATTTAAAGTGAGTGAACTAGCCAGCATTGTTACAAAAGCTGGCGAGAAGCTAGGTCTTGATGTGAAAACCATATCAGTTCCTAACCCAAGAGTGGAGTTAGAAGAGCATTATTACAATTGCAAAAACACTAAACTAGTTGATCTTGGACTAAGACCACACTTTCTTTCGGATTCCCTCATCGATTCACTTCTCAACTTTGCGGTTCAGTATAAAGACCGCGTTGACACGAAACAAATTATGCCTGGTGTTTCTTGGAGAAAGGTTGGGGTCAAAACAAAAACTATTTAA 1431 0.4214 MAQLLSSSSSLSFSAINKPNLKPFNQCSASFSNRVGCNYSSRTRFRRLFLREQKPSKRFAVVNAATVSTGQETPVQTNSGEPFKPKRVMVIGGDGYCGWATALHLSNKGYDVAIVDNLVRRLFDHQLGLDSLTPISSIQDRLQCWKSLTGKSIELYVGDICEFEFLSETFRSYEPDAVVHFGEQRSAPYSMIDRSRAVYTQQNNVVGTLNVLFAIKEYKEDCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETAMHEELCNRFDYDAIFGTALNRFCVQAAVGHPLTVYGKGGQTRAFLDIRDTVQCVELAIANPANPGEFRVFNQFTEQFKVSELASIVTKAGEKLGLDVKTISVPNPRVELEEHYYNCKNTKLVDLGLRPHFLSDSLIDSLLNFAVQYKDRVDTKQIMPGVSWRKVGVKTKTI* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1780 476 CDD SQD1_like_SDR_e 87 467 - -
Psa3g1780 476 Pfam NAD dependent epimerase/dehydratase family 88 376 IPR001509 -
Psa3g1780 476 Gene3D - 294 455 - -
Psa3g1780 476 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 86 455 IPR036291 -
Psa3g1780 476 Gene3D - 87 378 - -
Psa3g1780 476 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 63 475 - -
Psa3g1780 476 PANTHER BNAA03G52320D PROTEIN 63 475 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1780 1 476 Acyl Lipid Metabolism Gene Families AT4G33030 76.250 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1780 K06118 - gmx:100805019 847.04