Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1743 ATGTCGCCGGCGCCGATCAACTCCTCCTCCGATACAACTCCACGCACTCCTATTCACTTCGCTCCTTTCAATGCTGACGCCATCAAACCTCCTTCCTCCACTGCACGTGCTAGGTCGAGGCCGAGACTGGCGAAGTTGAGGAAGCAATCAGCGTCTCAGACCACAAGGTCGAGGAGCAGAACCGCATCTGCAGTCACCGGTTTCAATCCTTTTCGCTCTGATCAGGTATGTAGTGCTTCCGGAACTTGTGACTCCGGTTTTAATTCTATGAACGGTAGCGAGGGTTTTGTTTTTGGTGCTAGGAAGGTTGATTCTGATTCTGTTAGGGATTTGGATTCGGAGGTGAAAGAAACAGAGTTTAGGAAAAGTGGTAGTGTGGAATTTGTGTTTTGTGCTGAGGAAGTTTATGCTAAATTGGATTCAGTTTTTGAAGGAGAGGGAAAGAGTAGTGAGAATGAAGGGAAGACAGTTTCTGGTGAGGAAAGGGGGACATTAAATTCGGAAGGGGAGAAGGGGGAGGTTAATGTTACAGGATTCGTTTTTAGTGCTGGTAGAAACGATAATCCTTCTAGTTTGAATAAAGAAAAGGGAAAGCCTAGTGTGCCTGTGGGGAATTCGGGGTATGAATATGATGATGGTGGGGAGAGGGAATGTAAAGAATTTGTGTTTGGAAAGAAGGATTCTTATGGGGACAAGAATGGAGGTATTAAAATGTCTAGTTTTAATGTAGAAAAGCAGGATTCTGTTGACAGCATGAGAAATTCGGATAATGGAAGCTGTATTTTTCATGCTGAGACAGAAACATTTAGTAACTTTGGTAATGACGCTGATAAGGGTGGTAATCTGGGTAATGATATTAAGTCTAAGAGTGGAAATGGAAGTACTAATGGTTTTTCTTCTACTTATAGTGGCATTCATGTAAGTCAAGTAGTAGATGAGATGAAGAAGCTGAACATCAACCATCCCGAGGGTGTCCATATTCCTAGTGATTCGACAAATTCACATGTACATAGTAGCAATGGTTTTGTGTTTGGAGGAAGTGACAATGTTTCTAGCCGTATCAGTGTTAGTTCAGGATCTAATACTGGTGGTCAACAGTTGTATACTAATGATGATTTTGAGAATATTGGTGGGCAATATACTGAAGATTGCAGAACAAATGATGTTCAAAATGGCACTGCTCATGGTATTGCCCGGGATGCTGCAGCCACTGGGATACCTTGTTCTAAGACATCCACCAGTCAGGACGGGATCAACGATTTCCAATGTGGCAAAATTCCAGAGTTTCAAGTGTCTGAAGATGCCCAAGTGAATGGAACTGAACAGTCTTATACGGACTTTAAACCCCCAACCTGGGATCCTTCTAGTTTTAAAGAAAACTTATTTTGTAAGTTAAATGAAAAATTTGAATCCACACAAAACAGTAAATCTTCCAAAGAAAAAGGATCAAAATGTATGAGGCAAAAATTGAAGTCATGTTCCTTGAATAAGAAACAGACAAAGCTAGACCATTTGCCAAAGGAAAGCTGTTCACTTGAAACCCCTGAGCCTTCTGGCAGCTTCTCTCCGATGGATTTTTCTCCCTATCAGGAAGCATCAGCAGATGATCAAGATGTAAAGGCTTCAGAAGAATTAAATGTTCTTCACTCAACAATTCCTACCGATTTAAAAGACGAATGCTTGGCTGCTATAGGGAGAGAATATATCAACTCAGATGGTCAGAGATGTAGAGATCTTGGTAATGACCAGTCCTGTTATGGAAGTTCTTCTGTAGATGTTCATTCTTCTGCCCCCGAAATAATCTGGCCTAAGATGCAAACTCAAGTGTTCAGTAGCAGTAGTACTGCCAGTGTTTCTGCAGATGCTGGGGTTGACTTCACCTCAAACTCTGAAAAGAAAAAGGCTGATATATTTTGTTTTGATAATGGTTTGGGTGATTCGAAGGAGAAAGATTTTTCATTTTCTGCAGGATCCACTATAGAGATTACTTCATTATTTAAGCCTAAACAGAAGAAGAAATTTAGGAGGAAAACGGGTCGTGACTCATTTGTTATCTCTCCAAATGTGAATGGAAAATCTGTATCTTCTGTACAATTTTCACCACTTACTACTGCCAACATGTCATCACATTCTGATATGACAGATAAGTCTCACTTGAATAATCAGTTTGAGGAAGAGGGCGGTACGTTATTGGATACTACTGCCAACATGTCATCACATTCTGATATGACAGATAAGTCTCACTTGAATAATCAGTTTGAGGAAGAGGGCGGTACGTTATTGGATACTATTCAAGCAGCCTGTTACCAATGGAGACTCAGGGGGAACCGTGCTCATAAAGCTAAGGATCTTTCTAAAGCTGAGGAATGCTACACACAAGGAATAGTTTCTGTCCCTTCAAATAAAAGATCAGGATGCTGCATTAAGCCTCTTTTACTCTGCTATAGCAACCGTGCAGCAACACGTATGACTCTTGGAAGGATTAGAGAAGCTCTAGAGGATTGTATGATAGCATCTTCTTTGGACCCCACCTTTCTGAAAGTACAGATTAGAGCTGCTAATTGTCACCTTTTGCTAGGTGAAGTAGAAAATGCTCAGCGGTGCTATAACAAGTGCTTGGAATCAAGTAAAGTTGTTTGTTTGGATCGGAGAGTAACAGTTGAAGCAGCTGAAGGTTTACAGAAAGCTCAGGAAGTGGTGAAGTGTATGAATGATGCTGCTAAACTTTTGAAGGAAAGGACTTCTGATGCAGGTGGTTCTGCTTTAGAACTACTTACGAAGGCATTGTCAAAGAGCTTATACTCAGAAAGATTGCTCCAAATGAAGGCCGATGCTCTCTATCTGCTGCAAAAGTATGATGCAGCAATCCAGCTTTGTGACCAGAGTCTGAATCTTGCAGAAAAGAATTTTGTCTTGGCAAACAGTGTGAACAATTCCATGCATAATAGTTACTCAAGTGTAAAAATGTGGAGATGGTCATTTATATCTAAGTGTTACTTTCGTTTGGGGAAGCTTGATGCATCACTTAATGTTATTGAAAAATTACAGCAAACAGCATCTGCCAATGACAAGTGTGGGATTGATAACATTGAAGAGTTGCTGTCATTAGCTGCTACAATACAAGAACTTCTAGATCACAGGAAAGCAGGAAATGAGAACTTCAAAATGGGAAAGTATACAGAAGCGGTGGAGAACTACACTGCTGCTTTATCTACTTGTGACATCCGGAGACTTATTTCTGTTCTTGGATCTCAATCCAATGAAAAGGCCAAACATTCTGAATCTCCAAATGGATCAACTGGTGGCAAAGAATCAAGGCAAGCTCAACAACGTCTGCTTGCTGTGGAAGATCAAGCCAAAATGAGGACCCCCTTGGACTTTTATCTCATTTTAGGTATTAAACCAGCTGATACAGCAGCTGATATCAAGAAGGCATATCACAAGGCAGCTCTTAGACATCATCCTGACAAGGCTGGTCAGTTGTTGGCAAGAAGTGAAGTTGGGGATGAAGGTCTTTTCTGGAAAGAAATTTCCCAGGAGGTGCACAAGGATGCTGATAGGCTTTTTAAAATGATTGGAGAGGCATATGCTGTACTTTCAGACCCTGCCAAGCGCGAGGAGTATGACATGGAAGAGGACATAAGGAAACTTTATAAACAAAGTAACAGAGCTGGCGCATGCAGGAGATCATCAGACGTTTATGGGAATGGAAGATCATCTGATGGTTATAGATCTTCCTATGACAGAACTTATAACAGACGATATGGACATTGGAGCACATATGGAGATTCCTATTCTCGATGTCTGAACCCTCAGGCGACTGCTGCTATATTCTTTTGGTCTGACTCAGACCATTGCAAAAATAAGTTTGCACGTAGATATTGCAAGCATGAGCTATAA 3900 0.4115 MSPAPINSSSDTTPRTPIHFAPFNADAIKPPSSTARARSRPRLAKLRKQSASQTTRSRSRTASAVTGFNPFRSDQVCSASGTCDSGFNSMNGSEGFVFGARKVDSDSVRDLDSEVKETEFRKSGSVEFVFCAEEVYAKLDSVFEGEGKSSENEGKTVSGEERGTLNSEGEKGEVNVTGFVFSAGRNDNPSSLNKEKGKPSVPVGNSGYEYDDGGERECKEFVFGKKDSYGDKNGGIKMSSFNVEKQDSVDSMRNSDNGSCIFHAETETFSNFGNDADKGGNLGNDIKSKSGNGSTNGFSSTYSGIHVSQVVDEMKKLNINHPEGVHIPSDSTNSHVHSSNGFVFGGSDNVSSRISVSSGSNTGGQQLYTNDDFENIGGQYTEDCRTNDVQNGTAHGIARDAAATGIPCSKTSTSQDGINDFQCGKIPEFQVSEDAQVNGTEQSYTDFKPPTWDPSSFKENLFCKLNEKFESTQNSKSSKEKGSKCMRQKLKSCSLNKKQTKLDHLPKESCSLETPEPSGSFSPMDFSPYQEASADDQDVKASEELNVLHSTIPTDLKDECLAAIGREYINSDGQRCRDLGNDQSCYGSSSVDVHSSAPEIIWPKMQTQVFSSSSTASVSADAGVDFTSNSEKKKADIFCFDNGLGDSKEKDFSFSAGSTIEITSLFKPKQKKKFRRKTGRDSFVISPNVNGKSVSSVQFSPLTTANMSSHSDMTDKSHLNNQFEEEGGTLLDTTANMSSHSDMTDKSHLNNQFEEEGGTLLDTIQAACYQWRLRGNRAHKAKDLSKAEECYTQGIVSVPSNKRSGCCIKPLLLCYSNRAATRMTLGRIREALEDCMIASSLDPTFLKVQIRAANCHLLLGEVENAQRCYNKCLESSKVVCLDRRVTVEAAEGLQKAQEVVKCMNDAAKLLKERTSDAGGSALELLTKALSKSLYSERLLQMKADALYLLQKYDAAIQLCDQSLNLAEKNFVLANSVNNSMHNSYSSVKMWRWSFISKCYFRLGKLDASLNVIEKLQQTASANDKCGIDNIEELLSLAATIQELLDHRKAGNENFKMGKYTEAVENYTAALSTCDIRRLISVLGSQSNEKAKHSESPNGSTGGKESRQAQQRLLAVEDQAKMRTPLDFYLILGIKPADTAADIKKAYHKAALRHHPDKAGQLLARSEVGDEGLFWKEISQEVHKDADRLFKMIGEAYAVLSDPAKREEYDMEEDIRKLYKQSNRAGACRRSSDVYGNGRSSDGYRSSYDRTYNRRYGHWSTYGDSYSRCLNPQATAAIFFWSDSDHCKNKFARRYCKHEL* 1300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1743 1299 CDD DnaJ 1126 1201 IPR001623 -
Psa3g1743 1299 MobiDBLite consensus disorder prediction 144 170 - -
Psa3g1743 1299 MobiDBLite consensus disorder prediction 185 208 - -
Psa3g1743 1299 Gene3D Tetratricopeptide repeat domain 770 1095 IPR011990 GO:0005515
Psa3g1743 1299 PRINTS DnaJ domain signature 1128 1146 IPR001623 -
Psa3g1743 1299 PRINTS DnaJ domain signature 1146 1161 IPR001623 -
Psa3g1743 1299 PRINTS DnaJ domain signature 1184 1204 IPR001623 -
Psa3g1743 1299 MobiDBLite consensus disorder prediction 46 64 - -
Psa3g1743 1299 MobiDBLite consensus disorder prediction 144 168 - -
Psa3g1743 1299 MobiDBLite consensus disorder prediction 1086 1107 - -
Psa3g1743 1299 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1073 1267 - -
Psa3g1743 1299 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 9 1072 - -
Psa3g1743 1299 Pfam Tetratricopeptide repeat 849 876 IPR019734 GO:0005515
Psa3g1743 1299 SUPERFAMILY TPR-like 770 972 IPR011990 GO:0005515
Psa3g1743 1299 SMART tpr_5 846 879 IPR019734 GO:0005515
Psa3g1743 1299 SMART tpr_5 1043 1076 IPR019734 GO:0005515
Psa3g1743 1299 SMART tpr_5 936 969 IPR019734 GO:0005515
Psa3g1743 1299 SMART tpr_5 812 845 IPR019734 GO:0005515
Psa3g1743 1299 SMART tpr_5 989 1022 IPR019734 GO:0005515
Psa3g1743 1299 SMART tpr_5 768 801 IPR019734 GO:0005515
Psa3g1743 1299 SUPERFAMILY TPR-like 921 1072 IPR011990 GO:0005515
Psa3g1743 1299 SMART dnaj_3 1125 1204 IPR001623 -
Psa3g1743 1299 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1073 1267 - -
Psa3g1743 1299 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 9 1072 - -
Psa3g1743 1299 MobiDBLite consensus disorder prediction 1086 1109 - -
Psa3g1743 1299 MobiDBLite consensus disorder prediction 1 64 - -
Psa3g1743 1299 Pfam DnaJ domain 1126 1209 IPR001623 -
Psa3g1743 1299 ProSiteProfiles dnaJ domain profile. 1126 1212 IPR001623 -
Psa3g1743 1299 SUPERFAMILY Chaperone J-domain 1108 1208 IPR036869 -
Psa3g1743 1299 MobiDBLite consensus disorder prediction 1 17 - -
Psa3g1743 1299 Coils Coil 893 913 - -
Psa3g1743 1299 Gene3D DnaJ domain 1113 1230 IPR036869 -
Psa3g1743 1299 ProSitePatterns Nt-dnaJ domain signature. 1189 1208 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1743 Psa-Chr3 154682663 154692239 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1743 K09527 - gmx:100809278 981.859