Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1708 ATGGCGGCTTTGAAGGGGTTATTGAAAAAAGGTTTAGGAGAAATGGATTTCAACACCGGTGGAGGACTCATTAACTGGTTCCCAGGACACATGGCTGCCGCCACACGCGCCATCCGTAACCGCCTTAAACTCGCCGACCTCGTCATCGAAGTCAGAGACGCTCGTATTCCGTTATCCTCCATCAATGTCAATCTTCAACCTCATCTTTCCGCTAAACGGCGTGTCATCGCACTCAACAAAAAAGACTTAGCAAATCCCAACATCATGCATAAATGGGTGAATTATTTTGAGACGGGTAAGCAAGATTGCATTCCGATAAATGCTCACAGTAAGAGTTCTGTTACAAAGCTTCTGGAACTTGTGGAGTTGAAATTGAAGGAAGTGATGTCAAAGGAACCTACTTTACTTGTTATGGTGGTTGGTGTTCCTAATGTTGGCAAATCTTGTTTGATTAATTCAATTCATCAGATTGCACATTCCCGATTTCCTGTGCAGGAGAAGATGAAGCGAGCTGCTGTGGGTCCACTACCCGGTGTTACTCAAGATATTGCAGGATTTAAGATAGCAAACAAGCCGAGCATATACGTCCTAGATACCCCAGGGGTTCTGGTTCCAAGTATCTCAGACATCGAGACAGGGTTAAAGCTTGCTCTTGCAGGGTCTGTTAAAGATTCAGTAGTGGGCGAGGAGCGAATTGCTCAATACTTTTTGGCAGTTTTAAATACCCGGGGTACTCCATTTCACTGGAAGCACCTCAATAATAGGAGAGTTGATGCGATTGCAAATGAACCCGAGGAAAATCATAGATATGACCTGAAAAATCTTAAGCAAAGGAAAGGTGTGCCTAACAGATCTGACTTGGTATATGTGGAGGATATTGTCGCGGGAGTTCAGCGTGCACTTTATTCGACTCTAGCAGAATTCGACGGCAACGTAGAAGATGAGGGCGACTTGGAGAACTTGATTGACTTGCAGTTTGGTGCACTGCAGAAGGCATTGAAGATACCTCACAAGGCTTCAGAAGCACGATTGATGGTATCCAAAAAGTTCCTTACTCTATTCCGGGCTGGTAAATTGGGACCTTTTATTCTTGATGATGTCCCTGATGCCAAGCCTGTATAA 1122 0.4456 MAALKGLLKKGLGEMDFNTGGGLINWFPGHMAAATRAIRNRLKLADLVIEVRDARIPLSSINVNLQPHLSAKRRVIALNKKDLANPNIMHKWVNYFETGKQDCIPINAHSKSSVTKLLELVELKLKEVMSKEPTLLVMVVGVPNVGKSCLINSIHQIAHSRFPVQEKMKRAAVGPLPGVTQDIAGFKIANKPSIYVLDTPGVLVPSISDIETGLKLALAGSVKDSVVGEERIAQYFLAVLNTRGTPFHWKHLNNRRVDAIANEPEENHRYDLKNLKQRKGVPNRSDLVYVEDIVAGVQRALYSTLAEFDGNVEDEGDLENLIDLQFGALQKALKIPHKASEARLMVSKKFLTLFRAGKLGPFILDDVPDAKPV* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1708 373 CDD Ras_like_GTPase 139 293 - -
Psa3g1708 373 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 35 205 IPR030378 GO:0005525
Psa3g1708 373 Gene3D - 24 203 IPR027417 -
Psa3g1708 373 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 217 IPR027417 -
Psa3g1708 373 Gene3D - 208 283 IPR023179 -
Psa3g1708 373 PANTHER SHORT INTEGUMENTS 2, MITOCHONDRIAL-LIKE 23 370 - -
Psa3g1708 373 CDD YlqF 26 203 - -
Psa3g1708 373 PANTHER MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 23 370 - -
Psa3g1708 373 Pfam 50S ribosome-binding GTPase 137 243 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1708 Psa-Chr3 152803387 152808403 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1708 K19828 - gmx:100801130 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1708 3 152803387 152808403 Psa3g1708 3 152803387 152808403 ECH