Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1706 ATGGTGATGATATGGGAAGATCTAACCGTGACAATTGGTATAGACAAGAAAAAGAAGTTGCTTCATGGTGTCACTGCTTTTGCTCAACCTGCTAGGATTATGGCTGTTATGGGTCCTTCTGGCTGCGGCAAAACCACCTTACTCACCTCTTTGGCAGGAACACTTGCTGCAAATGTTACACTGTCTGGAAACATTGAAATCAACGGGAAGAAAAGAAGTTTGTACTCTAAAGAAGTGTCTTATGTTGGTCAAGAGGAACTTTTCTTGGGAACTTTGAGTGTAAGAGAAACCCTCACATACTCAGCAAACATGAGACTACCTTCTAAAATGACCAAACAAGAGATAAACAAATTGGTGGAAGAAACAATAATAGAAATGGGACTTGAAGACTGTGCTAACACTAAGATTGGAAATTGGCATTTAAGAGGTATTAGCAATGGTGAAAAGAAAAGACTTAGCATTGGTCTTGAGATTTTAACACAACCCTATGTGTTACTTCTTGATGAACCAACTAGTGGACTTGATAGTGCCTCAGCATTCTATGTCATTCAAGCCCTAAGCAACATAGCTTTTAAAGGAAAGATAGTTATTTGTTCAATTCATCAGCCAGGGTGTGAAACTTTTAACATTTTTGATGATTTGCTTTTGCTATCAAATGGAGAAACTGTTTATTTTGGACAAGCAAACATGGCTTTAAAGTTTTTTGGTGACGCAGGTTTTCCTTGTCCCACCAAAAGAAATCCTTCAGATCATTTCATTATGAGCATTAATTTGGACTTTGATTTGATTAATGAAGCTCTTGCAAGATGCCATACAACATCAAATTCAACAGTGGGAATTATAAGAACTGCAGACATTAGAAGAAAACTCATAGGGAGTTACAAAAGTTCAGATCTAACCATCAATACAAAAACAACAATTCAACAACTAAAAACCAAAACCAATGTGAAACAAGAGGAAGCAATAAATTCCAATAATGTAACAAACAGTGCCAACTGGATGAAGCAACTTTCCACACTCACCAAACGTTCTTTCCTTAACATGAGTAGAGACTTAGGCTACTATTGGCTCAGGATATTATTCTACACACTTACAGGAATTACTATTGGCACCCTCTTTTTCCACATTGGCACAGGCAACTCCTCCATCTTAGCTAGAGGAAAATGTGTATCATTCATTTATGGTTTCATGATATGTTTGTCATGTGGAGGATTACCATTTTTCATTGAAGAATTAAAGGTTTTCTATGGCGAAAGATCAAAAGGACATTGTGGAGAAGCTGCATTTGTAATATCAAATATAATATCATCATTCCCTTTCATCTTTCTAATATCAATCTCTTCAGGAATAATAATTTACTTCATGGTGCAATTTCATCCTGGTGTAAGTAATTGCGCATTTTTCTGTATCAACTTGTTCTGCTGCCTATCTGTTGTTGAGAGCTGCATCATGGTTGTAGCAGCAGTGGTCCCTAATGTCATGATGGGTCTAGGAACAGGAACCGGTTTTATAATTTTCATGATGCTGCCCTCCCAAATATTTAGACCACTAAATGACATTCCGAAGTTCTTTTGGCGCTATCCTATGTCCTACCTCAGTTTTGCAGCTTGGGCAGTTCAGGGACAGTACAAGAATGACATGTTAGGGGTTGAGTTTGATCCTCTACTACCTGGAGACCCAAAAGTTACTGGAGAACAAGTTTTACCAATACTATTTGGTGTTCCACTAAATCATGGAAAATGGTTGGACCTAGTAATGTTGATTATCTTATTATTTGTCCATAGGTTTCTTCTTTTCTTGGTGATTCGGTTTAACAAAAGAGGTATATCACATGTGCTATGGTTTTATGTCATGGAAAATCTACAATTTGCAAAACAACGTTTGTTGAAGAACAAACCATCTAAGAAACAAGAACTGCCACGTCCACTGTCATCTTTAGAGAATGCTATGTCACCAGACTATGCTATAGTAAGGCTTTGA 1980 0.3727 MVMIWEDLTVTIGIDKKKKLLHGVTAFAQPARIMAVMGPSGCGKTTLLTSLAGTLAANVTLSGNIEINGKKRSLYSKEVSYVGQEELFLGTLSVRETLTYSANMRLPSKMTKQEINKLVEETIIEMGLEDCANTKIGNWHLRGISNGEKKRLSIGLEILTQPYVLLLDEPTSGLDSASAFYVIQALSNIAFKGKIVICSIHQPGCETFNIFDDLLLLSNGETVYFGQANMALKFFGDAGFPCPTKRNPSDHFIMSINLDFDLINEALARCHTTSNSTVGIIRTADIRRKLIGSYKSSDLTINTKTTIQQLKTKTNVKQEEAINSNNVTNSANWMKQLSTLTKRSFLNMSRDLGYYWLRILFYTLTGITIGTLFFHIGTGNSSILARGKCVSFIYGFMICLSCGGLPFFIEELKVFYGERSKGHCGEAAFVISNIISSFPFIFLISISSGIIIYFMVQFHPGVSNCAFFCINLFCCLSVVESCIMVVAAVVPNVMMGLGTGTGFIIFMMLPSQIFRPLNDIPKFFWRYPMSYLSFAAWAVQGQYKNDMLGVEFDPLLPGDPKVTGEQVLPILFGVPLNHGKWLDLVMLIILLFVHRFLLFLVIRFNKRGISHVLWFYVMENLQFAKQRLLKNKPSKKQELPRPLSSLENAMSPDYAIVRL* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1706 659 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 236 IPR027417 -
Psa3g1706 659 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 1 626 - -
Psa3g1706 659 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 626 - -
Psa3g1706 659 Pfam ABC-2 type transporter 201 253 IPR043926 GO:0140359
Psa3g1706 659 Pfam ABC-2 type transporter 336 541 IPR013525 GO:0016020|GO:0140359
Psa3g1706 659 Gene3D - 2 235 IPR027417 -
Psa3g1706 659 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 3 244 IPR003439 GO:0005524
Psa3g1706 659 SMART AAA_5 30 221 IPR003593 -
Psa3g1706 659 Pfam ABC transporter 24 172 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1706 Psa-Chr3 152624524 152628018 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1706 30 226 Calmodulin-binding Proteins AT2G36910 26.601 1.14e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1706 - K05681 gmx:100802207 926.391