Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1696 ATGGCGTGCAATGGCAGCGGCGGCGGCTGTCAATCTGGTTGCTACAAAGATGAAGAAACGACATGCGGCCAACCAACTGCGTCTTCAGAGACCGATTCTAAGAGCTCTAGCAATCTCTGCCTCAAGTGCAAGCTAAACGACGTCGTTTCGGGTTACGGTGGAATCGACGATGGTCGTTTTTGCGCAGATTGCTTCAGGAGCAACTTGTTCGGGAAGTTTCGACTTGCTGTCACATCAAACGCTATGATCTCTCCCACCGATAGGGTCCTTGTTGCCTTCTCCGGTGGCCCTTCTTCCAGGGTAGCTTTACAATTTGTGCATGACATGCAAGAGAGGGCTCATAAGAACTTTGAAGCTAGTAGAGATAGGTCATTACCTGTGTTTGGTGTTGGTGTTGTGTTTATTGATGAGAGTGTTGTTTTCCCGATTCCTTCTCATGAAATGGAAGAGGCCGTTGAAGCTATTAGTTTGATCGTGTCGAGTTTAGCCCCGCCAAGGAAGGAGTTTCATTTTGTTCCTATTGAGACTGTTTACTCGTCGGATTCTAGTGATGGAAAGGAGAGGTTACTTGAGCTGATGAATGTAGTGAGTGATCCCACTGGTAGGGAAGATATGTTGCTTTCTCTGCGCATGCTGGCCTTGCAAAAGGTGGCTTCTGAATTTGGGTATAACAGAATTGTTTTAGGCTCGTGCATTTCAAGGATTGCTGCTCACGTCATTTCAGCCACTGTGAAGGGGCAAGGATATTCGTTACCTGCTGATATCCAGTATGTTGATGCTAGATGGGAAATTCCAGTTGTGCTTCCTCTGCGTGATTGTTTTATTCAAGAGATCAACATGTTTTGCCGTCTTGACAGTCTAAAGACTGTTAAACTGTCTACAGGTCCGAGTTCTAGCATTAATAGCTTGGTCTCATCTTTTGTGGCTTTATTGCAGGAAGAGAACCCTTCTCGGGAGAGCACAATTGTAAGAACAGCCGGGAAACTTATCCCCTTTCAATTCAACAGGATTCCCGAGATCATTGATGGTAATGTTCCATTGGCAACTCGAAGACGGCAAAAGAGATATAATCTCAAATCCAATGAATCTGTTTCCTCAGAATCTTTCTGTCCTCTCTGCAATAGCCCACTTGACAAAAGTGAGATTGTTGATTGGAGCAATCACAAAAACTGCAGAAGTAGTGACACTTTTTATACTTCTTGCTGTTCAAGTTGTCAATTTCAGATACTTCCACCAGATTCCACATCAATGGAGAAATTTTATATGGATTTACCGCATTCAGTGGTTGCCCGGTCAAACCAAGTCAACAATGGTAAATTGAATGCACTGAGGTATGTGTTTCCCTTCTTGGTCAAGTAA 1359 0.4422 MACNGSGGGCQSGCYKDEETTCGQPTASSETDSKSSSNLCLKCKLNDVVSGYGGIDDGRFCADCFRSNLFGKFRLAVTSNAMISPTDRVLVAFSGGPSSRVALQFVHDMQERAHKNFEASRDRSLPVFGVGVVFIDESVVFPIPSHEMEEAVEAISLIVSSLAPPRKEFHFVPIETVYSSDSSDGKERLLELMNVVSDPTGREDMLLSLRMLALQKVASEFGYNRIVLGSCISRIAAHVISATVKGQGYSLPADIQYVDARWEIPVVLPLRDCFIQEINMFCRLDSLKTVKLSTGPSSSINSLVSSFVALLQEENPSRESTIVRTAGKLIPFQFNRIPEIIDGNVPLATRRRQKRYNLKSNESVSSESFCPLCNSPLDKSEIVDWSNHKNCRSSDTFYTSCCSSCQFQILPPDSTSMEKFYMDLPHSVVARSNQVNNGKLNALRYVFPFLVK* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1696 452 PANTHER CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2 28 438 IPR019407 GO:0000049|GO:0002098|GO:0034227
Psa3g1696 452 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 63 289 - -
Psa3g1696 452 Hamap Cytoplasmic tRNA 2-thiolation protein 2 [CTU2]. 34 413 IPR019407 GO:0000049|GO:0002098|GO:0034227
Psa3g1696 452 Pfam Cytoplasmic tRNA 2-thiolation protein 2 299 392 IPR019407 GO:0000049|GO:0002098|GO:0034227
Psa3g1696 452 Gene3D HUPs 39 406 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1696 Psa-Chr3 150977877 150981707 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1696 K14169 - gmx:100804325 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1696 3 150977877 150981707 Psa3g1696 3 150977877 150981707 ECH