Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1670 ATGGAAGCTGAGATACCAAGTGGACAAGTGCCAACAAGTATAGCCATGGCAGATTCAGAGAAAGATGAATATAGCATTAATGATAGTCCCATTGAACAAGTGAGACTAACAGTTCCAATCACTGATGACCCTTCTCAGCCGGCACTCACTTTCCGGACATGGTTTCTAGGACTAGCTTCATGTGTGCTCCTTGCATTTGTGAATCAATTCTTAGGCTACAGAACCAATCCTTTGAAAATCACTTCTGTCTCCGCCCAGATTATTACACTCCCACTCGGGAAACTTATGGCTGCAACACTTCCTACACAACCAATTCAAGTGCCTCTCACAACCTGGTCTTTTTCGTTGAATCCGGGGCCGTTCTCTTTGAAGGAACATGTGTTGATAACTATCTTTGCTAGCTCAGGATCTAGTGGTGTTTATGCAATTAGCATAATCACAATTGTTAAGGCTTTTTATCACAAAAACATTCATCCTGTAGCGGCTTATTTGTTAGCGTTATCAACTCAGATGCTAGGGTATGGATGGGCTGGGATTTTCAGAAGGTTCCTTGTTGATTCACCTTACATGTGGTGGCCTGAAAACCTTGTGCAGGTCTCTCTATTTAGAGCATTTCATGAAAAAGAAAAAAGGCCTAAAGGAGGTACTTCTAGGCTGCAATTTTTTTTCCTAGTCTTTGTTGCTAGCTTTGCGTATTACATACTTCCCGGGTACTTTTTCCAAGCACTATCAACTGTGTCTTTTGTATGCTTGATTTGGAAAGATTCTGTCATTGCACAACAGATTGGTTCCGGAATGAAAGGCCTTGGTGTCGGTTCATTCGGCCTTGACTGGAACACTGTTGCTGGCTTCTTAGGCAGTCCTTTGGCTGTTCCTGGATTTGCCATCATCAACATACTAGCTGGTTTTTTATTGTATATGTATGTTTTGATTCCAATTGCTTATTGGAACAATTTATATGATGCAAAAAAGTTTCCACTCATCAGCTCTCACACATTTGACTCTACTGGGTCAACATACAACGTTACTCGCATTCTCAATACCAAAACTTTCGACATTGATATGGAAAGTTACAACAGTTACAGCAAGATCTATATGAGTGTCACGTTTGCATTCAAATATGGATTGAGCTTCACTGCTCTTACAGCAACTATTTCCCATGTTGTCCTCTTCCACGGAAAAATGATTCTACAGATGTGGAAGAAGACAACGAGTTCGCTAAAACAACTCGGGGATGTGCATACAAGAATCATGAAGAAAAACTATAAGCAGGTCCCTGACTGGTGGTTTATCACTATTCTGATTCTAATGGTTATGATGGCCTTGGTAGCCTGCGAAGGCTTTGGCAAACAGCTCCAACTTCCATGGTGGGGAGTCTTACTTTCTCTATCAATTGCATTATTATCCACCTTACCAATTGGTGTAATTGAAGCAACCACAAACATAAGAACAGGTCTCAATGTGATCACAGAGTTGGTTATCGGTTTCATCTATCCAGGAAAGCCACTAGCTAATGTAGCTTTCAAAACCTATGGCCATATCAGCATGGTACAAGCACTTGCTTTTCTTGGTGACTTAAAATTAGGGCACTATATGAAAATTCCACCAAAATCAATGTTCATTGTGCAGCTTGTAGGCACAGTAGTTGCATCATCTGTTCACTTTGGAACAGCATGGTGGCTTCTAACATCTATCGAGAACATATGCGCTGAATCATTGTTGCCAAAAGGTAGTCCTTGGACATGTCCTGGTGATGATGTGTTCTACAATGCTTCCATCATATGGGGAGTTGTATGGCCAAAGAGAATGTTTACCAAAGACGGCATTTATCCTGAGATGAATTGGTTTTTCCTTGTTGGTCTACTTGCACCTGTTCCAGTGTGGCTTCTTTCTCACAAATTTCCTAACCAGAAGTGGATTAAACTCATCAACATTCCTACTATCGCTGTAGGTGCATCTGGCATTCCACCAGTGAGATCAGTGAACTATATAACTTGGGGAATTGTTGGAGTTTTTTTCAATTTGTATGTTTATAGAAAGTTCAAAGCATGGTGGGCTAGACATACTTATATTCTTTCGGCTGGTTTAGATGCTGGAGTTGCGTTTATGGGTTTAGTACTTTATTTTGCACTTCAATCTTATGGTATTTTTGGTCCAACCTGGTGGGGGCTTGAAGCAGATCACTGCCCTTTGGCTGGATGCCCCACAGCTCAAGGTGTACATGCAGAGGGTTGTCCTGTACCCTGA 2247 0.4139 MEAEIPSGQVPTSIAMADSEKDEYSINDSPIEQVRLTVPITDDPSQPALTFRTWFLGLASCVLLAFVNQFLGYRTNPLKITSVSAQIITLPLGKLMAATLPTQPIQVPLTTWSFSLNPGPFSLKEHVLITIFASSGSSGVYAISIITIVKAFYHKNIHPVAAYLLALSTQMLGYGWAGIFRRFLVDSPYMWWPENLVQVSLFRAFHEKEKRPKGGTSRLQFFFLVFVASFAYYILPGYFFQALSTVSFVCLIWKDSVIAQQIGSGMKGLGVGSFGLDWNTVAGFLGSPLAVPGFAIINILAGFLLYMYVLIPIAYWNNLYDAKKFPLISSHTFDSTGSTYNVTRILNTKTFDIDMESYNSYSKIYMSVTFAFKYGLSFTALTATISHVVLFHGKMILQMWKKTTSSLKQLGDVHTRIMKKNYKQVPDWWFITILILMVMMALVACEGFGKQLQLPWWGVLLSLSIALLSTLPIGVIEATTNIRTGLNVITELVIGFIYPGKPLANVAFKTYGHISMVQALAFLGDLKLGHYMKIPPKSMFIVQLVGTVVASSVHFGTAWWLLTSIENICAESLLPKGSPWTCPGDDVFYNASIIWGVVWPKRMFTKDGIYPEMNWFFLVGLLAPVPVWLLSHKFPNQKWIKLINIPTIAVGASGIPPVRSVNYITWGIVGVFFNLYVYRKFKAWWARHTYILSAGLDAGVAFMGLVLYFALQSYGIFGPTWWGLEADHCPLAGCPTAQGVHAEGCPVP* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1670 748 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 27 712 IPR004648 GO:0055085
Psa3g1670 748 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 33 712 IPR004813 GO:0035673
Psa3g1670 748 Pfam OPT oligopeptide transporter protein 49 710 IPR004813 GO:0035673
Psa3g1670 748 PANTHER ISP4 LIKE PROTEIN 2 748 IPR004648 GO:0055085
Psa3g1670 748 PANTHER OLIGOPEPTIDE TRANSPORTER OPT FAMILY PROTEIN 2 748 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1670 Psa-Chr3 148691221 148694826 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1670 6 747 Organic Solute Cotransporters AT4G26590 66.398 0.0 1040
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1670 - - gmx:100820498 1323.15