Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1649 ATGAAAGTTAATGAAGTGAATGATAATCATTCCGTTGATATGGAGAAAGAGCAAAAAGAAGGGAATGGAGAAGTATCGGACACCGACACGATGAAGGATTCGGTATCATCTCATAGTGATTCTTTCACAAATGAAGATGAGAAAGTAGAGAAAGCTTCGAAGGATCCGAAGAGTAAGGTTAAAGGGAATGGTTTAGAAAACAATCGAGGATCGAGGGAGAAATCTGATAGGAAAACAAATAAACTGCAATCGAAGGTATCAGTTAGCAATCAAAAGAAACCGATAAACTCGAATAAAGGGCCTTTGAGAGTCGCAAACAAAAATACTTTAACCAATTCTAAGCCGGCGAAAGTTCCCGTAAAAGTTTCTTCAGAATCTTCTGAAGGAGTTGATGAAAAGCCTGTTACAGAAGTCAAGGAAATTGATATCTTGGATGGATCCTCCAATGGTGCTCAGAGCATAGGAAGTGAAGACGAAGGTCGTGTTGAAATCGTTAATGCTGAAGAAAACGGTGAACGTGAGGATGCGGCGGTTTTGGAATCGAAAGTTAAAGAAATGGAATCTCGAATTGAAAATCTTGAAGAGGAATTGAGGGAAGTTGCTGCTCTTGAGGTTTCGCTTTATTCTATTGTACCAGAGCACGGAAGCTCGGCACACAAAGTGCACACACCTGCTCGGCGGCTTTCTAGGCTCTATATACATGCTTGTAAGCATTGGACCCCGAAAAGGAAAGCCACAATTGCTAAGAACACTGTTTCTGGCCTTATTTTGGTTGCTAAATCTTGCGGTAATGATGTTTCAAGGTTAACTTTCTGGTTGTCGAACACCATTGTGCTGAGGGAGATAATTTCACAGGCATTCGGGAATTCGTGTCAAGTTAGTCCGATTATGAGGTTGGCTGGTTCAAATGGGTCTGCCAAGAGGAATGATGGGAAGTCTGCATCACTGAAATGGAAAGGTATCCCAAATGGTAAATCAGGAAACGGTTTTATGCAGATCGGTGAAGATTGGCAAGAGACCGGAACCTTCACGTTTGCCTTAGAAAGAGTGGAATCGTGGATTTTTTCTCGGCTAGTAGAGTCAGTGTGGTGGCAGGCTTTGACTCCTCATATGCAATCTTCGGTTGTGGACTCGTGTTCAAATAAATCCATTGGGAGGCTGCTAGGGCCTGCTTTAGGTGATCACAATCAAGGAAACTTTTCCATCAATCTCTGGAGAAACGCTTTCCAAGACGCGTTTCAAAGACTCTGTCCTGTTCGAGCAGGAGGGCACGAGTGTGGTTGTTTGCCCGTGATGGCAAGAATGGTCATGGAACAGTGTGTAGATAGACTAGATGTTGCGATGTTCAATGCAATTCTTCGAGAATCAGCCCATGAGATTCCAACTGATCCTATATCAGACCCGATTGTCGATTCCAAGGTTTTGCCAATTCCAGCAGGAAACTTAAGCTTTGGATCTGGTGCACAACTGAAAAATTCCGTTGGCAATTGGTCGAGATTGCTCACTGATATGTTCGGCATTGATGCTGAAGATTGTCTAGAAGAATATCAGGAGAACGGTGAGAACGACGAAAGGCAAAGCGGAGACGGTGAACGTAAATCATTTGCTCTCCTTAACGACTTGAGTGACCTTCTAATGCTCCCAAAAGACATGCTTATAGAAAAACAAGTTAGACATGAGGTATGTTCATCCATCAGTCTTTCTTTGATTATACGCGTTCTATGTAACTTCACACCGGACGAGTTCTGTCCCGACCCGGTTCCAGGAACTGTCTTGGAGGCCTTGAATGGAGAGACTTTTGTGGAGCGAAGACTGTCGGCGGAATCCATTAGAAGCTTCCCTTATGCTGCGGCTCCAGTTGCGTATACACCTCCCTCTTCAGCCAATGTGGCGGAGAAAGTTGCAGAGGCGGGAGGAAAGTCTCACCTGACGAGGAATGTATCGGTTGTCCAGAGGAGAGGATATACAAGTGACGAAGAACTTGAGGAACTTGAATCGCCGATCGCGTCTATCATTGATAAGGTTCCTTCTTCTCCAACAGTTACTACTAATGGAAATGGTAATCACAAGGAGCAAGGGAGTAACATTACAACAAATGCTAGATATCAACTACTTCGTGAGGTTTGGTCCATGTGA 2136 0.4387 MKVNEVNDNHSVDMEKEQKEGNGEVSDTDTMKDSVSSHSDSFTNEDEKVEKASKDPKSKVKGNGLENNRGSREKSDRKTNKLQSKVSVSNQKKPINSNKGPLRVANKNTLTNSKPAKVPVKVSSESSEGVDEKPVTEVKEIDILDGSSNGAQSIGSEDEGRVEIVNAEENGEREDAAVLESKVKEMESRIENLEEELREVAALEVSLYSIVPEHGSSAHKVHTPARRLSRLYIHACKHWTPKRKATIAKNTVSGLILVAKSCGNDVSRLTFWLSNTIVLREIISQAFGNSCQVSPIMRLAGSNGSAKRNDGKSASLKWKGIPNGKSGNGFMQIGEDWQETGTFTFALERVESWIFSRLVESVWWQALTPHMQSSVVDSCSNKSIGRLLGPALGDHNQGNFSINLWRNAFQDAFQRLCPVRAGGHECGCLPVMARMVMEQCVDRLDVAMFNAILRESAHEIPTDPISDPIVDSKVLPIPAGNLSFGSGAQLKNSVGNWSRLLTDMFGIDAEDCLEEYQENGENDERQSGDGERKSFALLNDLSDLLMLPKDMLIEKQVRHEVCSSISLSLIIRVLCNFTPDEFCPDPVPGTVLEALNGETFVERRLSAESIRSFPYAAAPVAYTPPSSANVAEKVAEAGGKSHLTRNVSVVQRRGYTSDEELEELESPIASIIDKVPSSPTVTTNGNGNHKEQGSNITTNARYQLLREVWSM* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1649 711 Coils Coil 176 203 - -
Psa3g1649 711 MobiDBLite consensus disorder prediction 1 81 - -
Psa3g1649 711 PANTHER NUCLEOLAR PROTEIN GAR2-LIKE PROTEIN 7 710 - -
Psa3g1649 711 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 7 710 IPR021827 GO:0005643
Psa3g1649 711 MobiDBLite consensus disorder prediction 82 120 - -
Psa3g1649 711 MobiDBLite consensus disorder prediction 1 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1649 Psa-Chr3 147503337 147506087 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1649 - - mtr:MTR_7g092460 1210.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1649 3 147503337 147506087 Psa3g1649 3 147503337 147506087 ECH