Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1643 ATGCCTTTCGATTTGTTCTTCTGGCTTCTCATTTGTTTCCCTTTCAATGTTGCCCTTTTGGCCTCAGCTTTCTACCAGGTTTTGATGTTATCTGACTTAGAAGCTGATTATATAAACCCTTATGATGCTTCATCTCGGATCAATTACTATGTGGTTCCTGAGTTTATTGCTCAAGGATTATTCTGCGCTCTCTTTCTCTTCACCGGTCACTGGTTCATGTTTCTTCTCATGCTTCCACTTGCTTCCTACCATGGGATGCTGTATGTTAAGCGGCAGCATCTCCTTGATGTTACTGAAGTGTTTAGGGTACTCAATGCTGAGAAGAAATTTCGGATAGCCAAACTTGCTTTTTACCTAATAATGGTTATTATAACTATCTTCAGGCTTGTATTACTCGCCGTCTTCTATTTAGATATGGACGATGAATGA 429 0.3986 MPFDLFFWLLICFPFNVALLASAFYQVLMLSDLEADYINPYDASSRINYYVVPEFIAQGLFCALFLFTGHWFMFLLMLPLASYHGMLYVKRQHLLDVTEVFRVLNAEKKFRIAKLAFYLIMVIITIFRLVLLAVFYLDMDDE* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1643 142 Pfam Cornichon protein 7 127 IPR003377 GO:0016192
Psa3g1643 142 SMART Cornichon_2 6 127 IPR003377 GO:0016192
Psa3g1643 142 PANTHER CORNICHON-RELATED 4 132 - -
Psa3g1643 142 PANTHER PROTEIN CORNICHON 4 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1643 Psa-Chr3 147035033 147043573 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1643 K20368 - gmx:100527262 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1643 3 147035033 147043573 Psa3g1643 3 147035033 147043573 ECH