Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1613 ATGTTGACTCCATCTCATCTCAAATCCTTGCACCCTCTTCAAATTTTCTCCCCAAAATCATCATCAACATCAACACATTCCTCAAATTTATCTTCCATGAAACTCAAAAGAATCATCCACACCCTCTTAGTTTCGCACTTGTGTAGAATATTTCGCGCACTCTCCAAACTCAAACATTACATCATCGAAATTCTCAAAGACAATGACAACAATTCAACCTTCAACTTCACTTACTACTCTTCTCACAAAAAACGTAACAACATGAGAAAAAAGATAATTTTGGGTTCTTTTAGACTTCATTACAACTGGTGTTCTTCAAAATCCTCGCATGTTTTGCCGGTTCCGGAACCGGTTTACGAGAATCCGGACGCAAATCTTGCGGGATATTTAGAGTGGCTTGAAGAGAAGAAAGTTGAAGAGGGTGCAAAAGAGAAAGAGAATATTGTGAATGAGAAAGAGAATATTGATATGTTGGCTGAAATGTTTATTGCTAATTGCCATGAGAAGTTTAAGCTGGAAAAACAAGAATCTGATAGAAGGTATCAAGAAATGCTTGCTAGAAGCATGTGA 570 0.3719 MLTPSHLKSLHPLQIFSPKSSSTSTHSSNLSSMKLKRIIHTLLVSHLCRIFRALSKLKHYIIEILKDNDNNSTFNFTYYSSHKKRNNMRKKIILGSFRLHYNWCSSKSSHVLPVPEPVYENPDANLAGYLEWLEEKKVEEGAKEKENIVNEKENIDMLAEMFIANCHEKFKLEKQESDRRYQEMLARSM* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1613 189 PANTHER EMB|CAB67623.1-RELATED 3 189 - -
Psa3g1613 189 Pfam Cotton fibre expressed protein 153 187 IPR008480 -
Psa3g1613 189 PANTHER DUF761 DOMAIN PROTEIN 3 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1613 Psa-Chr3 145565998 145567195 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1613 - - var:108323472 223.016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1613 3 145565998 145567195 Psa3g1613 3 145565998 145567195 ECH