Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1609 ATGCAGGGAGCAAAGAAAGCCGGAGAGACCATTAAGGAAACAGCTGCCAACATTGGTGCTTCAGCCAAATCTGGTATGGAGAAGACCAAAGCCACCGTCCAAGAAAAGACTGAGAAAATGAGCGCACGTGATCCTGTACAGAAAGAGGCAGCAACCCAAAAGAAAGAGGCGAAGATGAACCAGGCAGAGTTAGATAAACAGATGGCGCGTGAACACAACGCGGCAGTTAAAGAATCTACCACGGCAGCCCAAATGGGTCAGGCCCACCACAACACAGGGACTGGAACCACCACCACGGGAAATCATGGACAGCCCATGGGGGGCCACCATAGCACCGGGACCGGAACAGGAGCAGGCACTTACTCTACTATAGGAAATTATGGACAAACCACAGGGGCCCATGAGATGTCAGCCGTACCTGGACATCATACTGACCATGTTACCGACGGAGTGGTGGGCTCACATCCTATTGGGACCCACAGAGGCACAGATGGGACTACTACGGCCCATAATACCCGTGTTGGTGGAAATCCGAATGCCACAGGGTATACCACTGGTGGTGCTTACAAGTGA 573 0.5253 MQGAKKAGETIKETAANIGASAKSGMEKTKATVQEKTEKMSARDPVQKEAATQKKEAKMNQAELDKQMAREHNAAVKESTTAAQMGQAHHNTGTGTTTTGNHGQPMGGHHSTGTGTGAGTYSTIGNYGQTTGAHEMSAVPGHHTDHVTDGVVGSHPIGTHRGTDGTTTAHNTRVGGNPNATGYTTGGAYK* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1609 190 MobiDBLite consensus disorder prediction 162 190 - -
Psa3g1609 190 Pfam Late embryogenesis abundant (LEA) group 1 9 77 IPR005513 GO:0009793
Psa3g1609 190 MobiDBLite consensus disorder prediction 162 184 - -
Psa3g1609 190 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 46 1 189 - -
Psa3g1609 190 MobiDBLite consensus disorder prediction 29 60 - -
Psa3g1609 190 MobiDBLite consensus disorder prediction 1 60 - -
Psa3g1609 190 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 6-RELATED 1 189 IPR005513 GO:0009793
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1609 Psa-Chr3 145130282 145131701 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1609 - - gmx:547828 226.483