Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1608 ATGGGAGCTGGTGGCCGAACCTCTGTTCCTCCTTCGACCAGGAAATCAGAGAATGACACTGTGAAGCGGGTGCCATTTGAAAAGCCTCCATTTAGTCTCGGCCAGATCAAGAAGGCCATTCCACCTCACTGTTTTAAGCGTTCTGTTATCCATTCATTCTCCTATGTTGTTTATGACCTCACCATAGCCTTCTGTCTCTACTACATTGCCACTCATTACTTCCAGAACCTTCCTCACTCGCTCTCTTTCTTGGCCTGGCCTGCCTATTGGGCTGTCCAAGGTTGCGTTCTTACCGGTGTTTGGGTTGTTGCGCATGAGTGTGGCCACCACGCATTCAGTGACTACCAATGGCTTGATGATACAGTTGGCCTTGTTCTTCACTCTGCCCTTTTAGTCCCTTACTTTTCATGGAAATATAGCCATCGTCGCCACCATTCCAACACGGGTTCTCTTGAGAAGGATGAAGTATTTGTGCCTAAACAAAAGTCCAGTATCTATTGGTACTCCAAATACCTTAGCAACAACCCACTAGGAAGAATCCTCACTATTACTATCACACTCACTCTTGGCTGGCCGCTTTACTTGGCTCTCAATGTTTCAGGCAGGCCTTATAAAGGGTTTGCTTGCCACTTTAACCCACATGGTCCCATTTACTCAGATCGTGAACGCCTTCAAATATATGTATCAGATGCGGCAATACTTGCAGTATGCTTTGGGCTTTATCATGTTGCATTGGCCAAAGGTCTTGCCTGGGTTGTGTGTGTTTACGGAGTTCCACTGCTCGTAGTCAATGGATTCTTGGTGTTGATCACATTTTTGCAGCATACTCACCCTGCGTTGCCACATTACGATTCCTCGGAGTGGGACTGGTTGAGAGGAGCTTTAGCAACTGTGGACAGGGATTATGGAATCCTGAACAAGGTCTTCCACAATATTACAGACACTCATGTGGCACATCACTTGTTCTCCACAATGCCACATTATCATGCAATGGAGGCTACCAAGGCAATAAAACCAATTTTGGGAGAATATTATCGGTTGGACGAAACACCGTTTTACAAGGCATTATGGAGGGAAGCAAGAGAGTGTATCTATGTTGAGCCAGATCAAGGTACCGAGGGAAAAGGTGTATTCTGGTACAACAATAAGTGGTGA 1155 0.4597 MGAGGRTSVPPSTRKSENDTVKRVPFEKPPFSLGQIKKAIPPHCFKRSVIHSFSYVVYDLTIAFCLYYIATHYFQNLPHSLSFLAWPAYWAVQGCVLTGVWVVAHECGHHAFSDYQWLDDTVGLVLHSALLVPYFSWKYSHRRHHSNTGSLEKDEVFVPKQKSSIYWYSKYLSNNPLGRILTITITLTLGWPLYLALNVSGRPYKGFACHFNPHGPIYSDRERLQIYVSDAAILAVCFGLYHVALAKGLAWVVCVYGVPLLVVNGFLVLITFLQHTHPALPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYRLDETPFYKALWREARECIYVEPDQGTEGKGVFWYNNKW* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1608 384 Pfam Domain of unknown function (DUF3474) 25 66 IPR021863 GO:0016717
Psa3g1608 384 CDD Delta12-FADS-like 47 330 - -
Psa3g1608 384 PANTHER OLEATE HYDROXYLASE FAH12 1 384 - -
Psa3g1608 384 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 1 384 - -
Psa3g1608 384 Pfam Fatty acid desaturase 85 346 IPR005804 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1608 Psa-Chr3 145095279 145100599 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1608 1 383 Lipid Metabolism Gene Families AT3G12120 78.068 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1608 K10256 - gmx:547815 710.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1608 3 145095279 145100599 Psa6g2845 6 233116160 233119543 PCT