Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1552 ATGAAGATTTCTACATATTCTCTTATCTTTTTGTGCTTCTTTCAATCCACGCGAGCAATCTTAAATCCTATTGATTTCTTAGCACTACAGTCTATTAGAAGATCGCTTCACGATGTTCCTGGTTCAAATTTCTTTTCAACTTGGGACTTCACTGACGATCCGTGCAACTTCGCCGGAGTTTACTGTGTTTCGGATAAAGTTGTTGCTCTCAATCTCGGTGAATCTAGAGCCGGTTCTCCTGGTTTAACCGGGAAAATAGACACCGCAGTTGGAAAACTCTCTTCTCTCGTCGACTTAACCGTTTCTCCAGGTAGAGTTTACGGTCCTCTTCCTCAGTCCATTTCCAAATTGAAGAACCTCAAGTTTCTCGGCATCAGCCGGAATTTCATCTTCGGCGAGATTCCGGCGGGGCTAGGTCAGCTTCGCAGTCTTCGAACAATCGATCTAAGCTACAATCAGCTCTCCGGAGCTATTCCTCCGTCAATCGGAAAAATGACAAATCTAAACAACCTGATCCTCCGTCATAACCGTCTCACCGGTTCAATTCCATCCTTCGCTTCAGCTAAAAACCTGAACCGGCTCGATCTAAAGCACAACTCACTCACCGGTTCACTTGCTCCCGATTCTCTCCCATCTTCTCTACAATACCTCTCTCTATCATGGAACCAGCTTACCGGAACGGTGGATCGGGTTTTATACAGACTAAACCGGCTCAACTACCTTGATCTAAGCTTCAACCGGTTCACCGGTTCCATCCCGGCTCAGTTATTCTCATTCCCGCTAACTAACTTACAATTAGAAAGAAACCAATTATACGGTCCGGTTGAACCGTTTAATGAAGTTACAATCCAAACCGTTGATCTTAGTTACAACAAACTATCAGGTGAAATATCACCTTTACTAGCAAGTGTGCGAAATTTGTATCTAAACAATAACGGTTTCACCGGCGAGGTTCCCGGTAGCTTTGTTGAACGGTTATTAGCAGCAAATATTCAGATACTGTATTTGCAGCATAATTATCTTACCGGAATTGTGATAAATCCAACGGCGGAGATTCCATTGAGCAGTTCTCTTTGTTTACAGTATAACTGTATGGTTCCTCCTATCCAGATGACGTGTCCTTCCAAAGCTGGTTACCTCAAAATTAGACCTGCTAACCAGTGCAACCATTACCAATACCATTGA 1185 0.4354 MKISTYSLIFLCFFQSTRAILNPIDFLALQSIRRSLHDVPGSNFFSTWDFTDDPCNFAGVYCVSDKVVALNLGESRAGSPGLTGKIDTAVGKLSSLVDLTVSPGRVYGPLPQSISKLKNLKFLGISRNFIFGEIPAGLGQLRSLRTIDLSYNQLSGAIPPSIGKMTNLNNLILRHNRLTGSIPSFASAKNLNRLDLKHNSLTGSLAPDSLPSSLQYLSLSWNQLTGTVDRVLYRLNRLNYLDLSFNRFTGSIPAQLFSFPLTNLQLERNQLYGPVEPFNEVTIQTVDLSYNKLSGEISPLLASVRNLYLNNNGFTGEVPGSFVERLLAANIQILYLQHNYLTGIVINPTAEIPLSSSLCLQYNCMVPPIQMTCPSKAGYLKIRPANQCNHYQYH* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1552 394 Pfam Leucine rich repeat 119 178 IPR001611 GO:0005515
Psa3g1552 394 Gene3D Ribonuclease Inhibitor 187 377 IPR032675 -
Psa3g1552 394 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Psa3g1552 394 SUPERFAMILY L domain-like 34 375 - -
Psa3g1552 394 Pfam Leucine Rich repeat 212 226 IPR001611 GO:0005515
Psa3g1552 394 Gene3D Ribonuclease Inhibitor 25 186 IPR032675 -
Psa3g1552 394 PANTHER LRR RECEPTOR-LIKE KINASE 2 390 - -
Psa3g1552 394 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 2 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1552 Psa-Chr3 140033766 140036677 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1552 112 365 Receptor kinase-like Gene Family AT3G51740 31.835 6.45e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1552 - - gmx:100817314 605.905