Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa3g1525 | ATGGCACCTACTCGAAAAAAGGGCGCCAAGAAATCAGTGCCCGCAGCTGCTGCTTGCCGGGAATGGAAAAACGGCGATCTCGTGCTTGCTAAAGTGAAAGGCTTCCCTGCTTGGCCTGCAACGGTAAGTGATGCGAATAAATGGGGTTACTCAGCGGATCGGAAGAAAGTATTTGTTCTCTTCTTTGGAACCGATCAAATGTATGTATTCAAATCCATATCTCATTTGATTGAATTTGCCACTGCTATGCCTTAA | 255 | 0.4588 | MAPTRKKGAKKSVPAAAACREWKNGDLVLAKVKGFPAWPATVSDANKWGYSADRKKVFVLFFGTDQMYVFKSISHLIEFATAMP* | 85 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa3g1525 | 84 | Pfam | PWWP domain | 25 | 70 | IPR000313 | - | |
| Psa3g1525 | 84 | Gene3D | - | 3 | 83 | - | - | |
| Psa3g1525 | 84 | PANTHER | LD23804P | 1 | 67 | - | - | |
| Psa3g1525 | 84 | PANTHER | HEPATOMA-DERIVED GROWTH FACTOR-RELATED | 1 | 67 | - | - | |
| Psa3g1525 | 84 | ProSiteProfiles | PWWP domain profile. | 24 | 82 | IPR000313 | - | |
| Psa3g1525 | 84 | SUPERFAMILY | Tudor/PWWP/MBT | 19 | 80 | - | - | |
| Psa3g1525 | 84 | SMART | PWWP_4 | 22 | 80 | IPR000313 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Psa3g1525 | Psa-Chr3 | 138968665 | 138969781 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Psa3g1525 | - | - | nta:107764551 | 110.538 |