Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1512 ATGAAATGTGCATTTGTTAGCGGTCGTTTTACAATTACAGCGGAAGAAGATGAATATGGTAATTCTACCGGTTGGGATAAAGAAGATGAAGGTCTTTTGGAGGCCGAAAAACACCGATTGTGCCCGTGCCGTGATTCGCGATTTTCCACCGTCACTCCTCTCTTCCCCGCCGCCATGAAGCTCGTTAGGTTTCTCATGAAGTTGAACAACGAAACTGTCTCAATCGAGTTAAAGAATGGTACTATTGTTCACGGCACCATTACAGGTGTTGATATTAGTATGAATACACATTTGAAAGCCGTTAAACTAACCCTAAAGGGGAAAAATCCTGTTACTCTAGATCATCTCAGTGTGAGAGGCAACAACATTCGTTACTATATCCTTCCTGACAGCTTAAATCTGGAAACTTTACTGGTTGAAGAGGCTCCTAGGGTCAAGCCTAAGAAGCCAACTGCTGGGGGAAAGCCGTTGGGGCGAGGACGGGGGAGAGGACGTGGACGCGGTCGTGGCCGTGGCCGTTAA 522 0.4655 MKCAFVSGRFTITAEEDEYGNSTGWDKEDEGLLEAEKHRLCPCRDSRFSTVTPLFPAAMKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKAVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEEAPRVKPKKPTAGGKPLGRGRGRGRGRGRGRGR* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1512 173 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 59 169 IPR027141 GO:0006396
Psa3g1512 173 Gene3D - 55 143 - -
Psa3g1512 173 SUPERFAMILY Sm-like ribonucleoproteins 62 171 IPR010920 -
Psa3g1512 173 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D1 59 169 - -
Psa3g1512 173 MobiDBLite consensus disorder prediction 142 173 - -
Psa3g1512 173 SMART Sm3 63 128 IPR001163 -
Psa3g1512 173 Pfam LSM domain 63 127 IPR001163 -
Psa3g1512 173 CDD Sm_D1 60 151 IPR034102 GO:0000387
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1512 Psa-Chr3 138189936 138193157 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1512 K11087 - cpap:110814760 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1512 3 138189936 138193157 Psa3g1512 3 138189936 138193157 ECH