Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1500 ATGGAAGCAACGCGATTCTCTCTCTATCACTTCCATCCTCACAACTTCCGTCCCAAACCCACCGCACTTCTCTCAGGAAGAAGACACGCAGAAACTAGGGTTTCACTTTTCACAAGAAATTCACATTCGCTTAACCGGAGAATTTCCGTTAACTTCTCTGACCGACTCCGAAGTGATTATATCCGTTCTGAGACGCCGCTTTTGAGTGAAGAAGGTGTTCCGGAGAGTACTCGCAGTGATGATGTTGAAACAATTGTTGGTTCTTCTGGCGGTGATAACTCGTTAATAACCTTAGAGTTGAAACCTAGAGCGTTTAAAAATAGGTTTCTGAACTTTGTGCGTTTTGGTTCTGTTATTAATGGTGCTGCTGAGGCGTTTTTTAAGAGCGAGATTCGGAGGAGGTTGTTTGTTACTGCTGTGTTGATTGTGATTAGTCGTGTTGGTTATTTTATTCCTCTTCCTGGATTTGACAGAAGGTTGATACCAAAGGATTATATGAGCTTTGTCTCTGGTTCATCTGTTGATGAACTTGGTGACTTCTCCTCTGAGCTCAAGCTGTCTCTTTTCCAACTTGGAATCAGTCCTCAAATAATAGCATCCATTATTATGCAGGTATTCTGTCATGTTGTTCCTTCTCTAGTAAAGTTGCGGAAAGAAGGTTTGGATGGGAATGAGAAGATTAAGAGTTATATTTGGTGGCTGTCGCTGGGCTTTGCAATTGTGGAAGCTCTAATAGTTTCTTGCTACTCACTTCCATACTCAATTTACGCCGCTAGTTATAGGTTTAAACATGTAATGCTGACAACTTTTTTTTTGGTTTGTGGTGCAATGACTATTACATGGATATGTGATACCATATCAGAATCTGGATTTGGTCAAGGTTCATCTCTTATTATATGTGTTGGAATACTGATTGGGTATATGGAGACATTACACAAAATGCTTACCCAGCTTTCAGCGAGTGCTGTTAGTTGGTGGCCGTATGTGCTTGCAGTATTGGGCCTCTTCACAATAGTCACTATGTGGGCAGTTGTAGTTACTGAAGGTTGCAGGAAAGTAAAGCTTCAGTACTATGGTTTTAAACTTGCTTCTGCTGCAAGGGAGCAATCGCCTATAACGGAAGTGGAACCCTATATTCCTTTCAATATTAATCCAGCAGGGATGCAACCTGTTCTTACCACCTCTTACCTCTTGGCCTTTCCAAGCATTGTCGCTAGTTTGCTTCAGTCACCTTTTTGGGAGCGTGTGAAGGAAATGTTGAATCCCGACTCTTCTGTTGGCGCTGAACCGTGGGTCTACTATTCCATATATGCATTCTTTGTCTTCCTTTTCAATATATTTGACATTGCTAACTTGCCAAAGGAAATTGCTGATTACTTGAATAAGATGGGTGCAAGGATACCTAATGTTAAGCCTGGGAAGGCTACGATAGAATACCTCTCAAAGGTTCAGGCATCCACACGATTTTGGGGGGGCCTACTGTTAAGTGTTTTGGCTACTACTTCAAGTGTTCTCGATCACTATTTACGGCGTAGAAATGCTGGTTTTGCTATTGGTTTTACATCAATTCTAATTATTGTTGGTTCCATTATTGAACTTAGAAGATCGTATCAAGCATATAACGTGATGCCAGGATTAAGCAATGCTTTGAAGCGTTATGGTGTATAA 1668 0.4119 MEATRFSLYHFHPHNFRPKPTALLSGRRHAETRVSLFTRNSHSLNRRISVNFSDRLRSDYIRSETPLLSEEGVPESTRSDDVETIVGSSGGDNSLITLELKPRAFKNRFLNFVRFGSVINGAAEAFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPKDYMSFVSGSSVDELGDFSSELKLSLFQLGISPQIIASIIMQVFCHVVPSLVKLRKEGLDGNEKIKSYIWWLSLGFAIVEALIVSCYSLPYSIYAASYRFKHVMLTTFFLVCGAMTITWICDTISESGFGQGSSLIICVGILIGYMETLHKMLTQLSASAVSWWPYVLAVLGLFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREQSPITEVEPYIPFNINPAGMQPVLTTSYLLAFPSIVASLLQSPFWERVKEMLNPDSSVGAEPWVYYSIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLSKVQASTRFWGGLLLSVLATTSSVLDHYLRRRNAGFAIGFTSILIIVGSIIELRRSYQAYNVMPGLSNALKRYGV* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1500 555 SUPERFAMILY Preprotein translocase SecY subunit 115 540 IPR023201 -
Psa3g1500 555 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 109 554 IPR002208 GO:0015031|GO:0016020
Psa3g1500 555 PRINTS Preprotein translocase SecY subunit signature 135 153 - -
Psa3g1500 555 PRINTS Preprotein translocase SecY subunit signature 186 206 - -
Psa3g1500 555 PRINTS Preprotein translocase SecY subunit signature 227 250 - -
Psa3g1500 555 PRINTS Preprotein translocase SecY subunit signature 262 287 - -
Psa3g1500 555 PRINTS Preprotein translocase SecY subunit signature 288 311 - -
Psa3g1500 555 PRINTS Preprotein translocase SecY subunit signature 386 405 - -
Psa3g1500 555 PRINTS Preprotein translocase SecY subunit signature 431 453 - -
Psa3g1500 555 PRINTS Preprotein translocase SecY subunit signature 519 537 - -
Psa3g1500 555 Gene3D SecY subunit domain 119 545 IPR023201 -
Psa3g1500 555 Pfam SecY 187 533 IPR002208 GO:0015031|GO:0016020
Psa3g1500 555 PANTHER PREPROTEIN TRANSLOCASE SUBUNIT SCY2, CHLOROPLASTIC 109 554 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1500 38 555 Miscellaneous Gene Families AT2G31530 73.308 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1500 - - gmx:100803256 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1500 3 137246690 137253796 Psa3g1500 3 137246690 137253796 ECH