Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1488 ATGGATACGGTTGAGGAAGTTGAGATTCCAATTCCATCATCATCATCATCATCATCATCATCATCATCATCATCAATGGCGAAGAGACCTTGTCCATCTCAAAACCCTAGAATGGAGGTCGAAAATCTCCTCGACGAGTTTCTCTCTCTTTCTGACCGTCCTTCTCTCTCCCTCGATCTCTCCTTAGAGAATCTTCTTCAATCAATGCCTCCAGACTCCGATCTCATCGATCGCGCTCTTAGAATGGGTTCTCTCCTTCTCGATGCTGCCAAACATTCCTCTCGCAAACGCTCTTCCAACCACAATTCAATCGTCTGGCCTTTCCCTCCTGACCTCACCTTCAAGATCTTCTCGATGCTTGATACTCAGAGCCTGTGCTATGTATCTGCTGCTTGTTCATTTTTTAGCAAATGTGCTAAAGATCCTTTGTGCTATCAGAATATTGATTTGACAACACTTGTTCCTAAGGTTAACAATGCAGTAGTTGCTACTATGATTCAGCGAGCTGGAAAGGCACTAAGGTCTCTTAAACTTGGTGTTGTCCCTGCTACTGTTTGTTCTCCTGGATTTTGTCAACCATTAGTTTCTACCGTCAGAAAAGCTATTGTAGAGGCGCCTAACTTTTCATGGAATGATAAGAGGTCTCGTCAAGGGCGAGAATCATCCATTCTTACAAGATGCTGTTTAAATCCTTTAAGTGCGGAGGGTGGTGCACCGGGGGCTCTTTTGAGAAAGTTACACCTATACAACATTGAGAGGATGGACAACACATCCCTTTGTTGTGCATTGTCAGCATGCCCTTCTCTCCTTGATCTGGAAATTGTTGGAATCCATGTTGAACTGAGGCAAACTCTAATGTCAGTAAGTGCAAACTGCCACTTGATTGAGCGTTTGTTTTTCGAGTCTTCCAGAACAGGTAGAGATGACAGCTTGAAAGCGCAAACCTGTTCTGAGCTAGTAAACAATTGTCCTCATCTAAGCTCTTTATCTCTTCGAGGGTTTAAGCTACATGATTGTAAAGTTCGCATACTGGTTAAGGGATTTCGGAAACTGAAATATGTTGATTTTTCAACATCATATTCAATCACTGGAAATTTCTTAAGAAACCTTGGAAGCGGCAATGGTGGAAATTTGCTTGAGGTCTTAATTTTAAGGGATTGCATGCATCTCAAAGAGATGGAAGTTGCTAGGATGTTGACAGCAATTCTTGAAGGAGATTTCAAATTGCTTATACATCTTGACATATCCAACAGGGAAGGCTTAGCATGTGAGGCTGACTGGTATCACAGGTGCTACAACTCTAGCATTATGCCTATTAAGCAGGTTTTGGAAGCAAGGCCTGATATGCGTGTGGTGGCTGAATATCCATCAGAAGGAAGCTATGTCGAGACATTTGATACTGATATGACTAGTGATATAAGTCTGTTATCACAACTTAGCAGCCCCACATCAGATGGATCAATTTTTATGAGTACATCTGAAGGCAGCTACAACAGCGATCATGGTAGTGGAAATGAGGAAGGACAAGATGCGGTGATTTATGGGGAAAGTTCTGATGAAGACAATAATCTGAGCCTGTAA 1581 0.4231 MDTVEEVEIPIPSSSSSSSSSSSSSMAKRPCPSQNPRMEVENLLDEFLSLSDRPSLSLDLSLENLLQSMPPDSDLIDRALRMGSLLLDAAKHSSRKRSSNHNSIVWPFPPDLTFKIFSMLDTQSLCYVSAACSFFSKCAKDPLCYQNIDLTTLVPKVNNAVVATMIQRAGKALRSLKLGVVPATVCSPGFCQPLVSTVRKAIVEAPNFSWNDKRSRQGRESSILTRCCLNPLSAEGGAPGALLRKLHLYNIERMDNTSLCCALSACPSLLDLEIVGIHVELRQTLMSVSANCHLIERLFFESSRTGRDDSLKAQTCSELVNNCPHLSSLSLRGFKLHDCKVRILVKGFRKLKYVDFSTSYSITGNFLRNLGSGNGGNLLEVLILRDCMHLKEMEVARMLTAILEGDFKLLIHLDISNREGLACEADWYHRCYNSSIMPIKQVLEARPDMRVVAEYPSEGSYVETFDTDMTSDISLLSQLSSPTSDGSIFMSTSEGSYNSDHGSGNEEGQDAVIYGESSDEDNNLSL* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1488 526 SUPERFAMILY F-box domain 108 154 IPR036047 GO:0005515
Psa3g1488 526 MobiDBLite consensus disorder prediction 1 36 - -
Psa3g1488 526 SUPERFAMILY RNI-like 234 418 - -
Psa3g1488 526 MobiDBLite consensus disorder prediction 494 526 - -
Psa3g1488 526 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 39 469 - -
Psa3g1488 526 PANTHER F-BOX SKIP17-LIKE PROTEIN 39 469 - -
Psa3g1488 526 MobiDBLite consensus disorder prediction 9 31 - -
Psa3g1488 526 Gene3D Ribonuclease Inhibitor 104 404 IPR032675 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1488 K10268 - gmx:100786317 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1488 3 135688644 135695196 Psa3g1488 3 135688644 135695196 ECH