Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1467 ATGTCTGGACTGATTGAAGGACTTCCTGATGCTGTTGCAATAAGGTGCCTTGCACGCGTTCCCTTCTACCTCCATCCAAAGTTAGAGGTTGTCTCTCGTTCTTGGAAAGCAGCCATTCGTAGCCCAGAACTATCAAAAATACGACAGGAAATTGCTGCATCTGAGGATCTCTTGTGTGTCTGTGCTTTTGATCCAGAGAACGTATGGCAACTGTATGACCCTCTAAGAGATATCTGGATTACCCTTCCTGTTCTTCCCTCAAAGATCAGGCATCTTGCTCACTTTGGTGCCGTATCTGTATCTGGAAAATTGTTTGTCATTGGTGGTGGAAGTGATGCTGTTGATCCATCGACTGGTGATCACGATGGCTGCTTTGCAACCGATGAAGTCTGGTCATATGACCCCATAATCCAGCAGTGGTCCCCTCGGGCTTCAATGCTTGTTCCCCGTTCTATGTTTGCATGCTGTGTTTTGAATGGAAAAATTGTTGTCGCCGGAGGATTCACTAGCTGTAGAAAAACAATATCTCAAGCAGAAATATATGACCCCGAGAAGGATTTTTGGACTCCAATCCCTGATCTTCACCGCACACATAATTCAGCCTGTTCAGGAATAGTGATTGGTGGAAAAATGCATGTACTGCACAAGGATATGTCAACGGTGCAAGTTTTAGACAATGCAGGGGCTAGATGGATTGTGGAGGACTGTGATTGGCTTCAAGGCCCAATGGCAGTAGTCCAGGATGCACTTTGTGTTATGAGCAATGGATTTATCATGAAGCAAGACAAAGAAGGGAAAAAGATTGTAAGTTCAGCAACAGATTTTAAACAGAGAATTGGGTTTGCAATGATTGGACTAGGCGATGATTTATACATGATAGGGGGCGTCATTGGACCTGACAGATGGAATTGGGACATTAAGCCATTATCAAATGTTGATGTTCTAACACTTGGGAGTGAGAGACCAACTTGGCGCCAAACAGCTCCAATGACACGGTGCCGTGGTACCATTGTTGGTTGTACAATTATGAGAATTTAG 1038 0.4441 MSGLIEGLPDAVAIRCLARVPFYLHPKLEVVSRSWKAAIRSPELSKIRQEIAASEDLLCVCAFDPENVWQLYDPLRDIWITLPVLPSKIRHLAHFGAVSVSGKLFVIGGGSDAVDPSTGDHDGCFATDEVWSYDPIIQQWSPRASMLVPRSMFACCVLNGKIVVAGGFTSCRKTISQAEIYDPEKDFWTPIPDLHRTHNSACSGIVIGGKMHVLHKDMSTVQVLDNAGARWIVEDCDWLQGPMAVVQDALCVMSNGFIMKQDKEGKKIVSSATDFKQRIGFAMIGLGDDLYMIGGVIGPDRWNWDIKPLSNVDVLTLGSERPTWRQTAPMTRCRGTIVGCTIMRI* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1467 345 SUPERFAMILY Kelch motif 61 334 IPR015915 GO:0005515
Psa3g1467 345 Gene3D - 60 343 IPR015915 GO:0005515
Psa3g1467 345 Pfam Kelch motif 149 194 IPR006652 GO:0005515
Psa3g1467 345 Pfam Kelch motif 92 146 IPR006652 GO:0005515
Psa3g1467 345 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 2 345 - -
Psa3g1467 345 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP30 2 345 - -
Psa3g1467 345 SMART kelc_smart 161 208 IPR006652 GO:0005515
Psa3g1467 345 SMART kelc_smart 289 344 IPR006652 GO:0005515
Psa3g1467 345 SMART kelc_smart 103 160 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1467 Psa-Chr3 133913551 133917613 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1467 8 188 Miscellaneous Gene Families AT4G33900 28.947 2.83e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1467 - - cam:101512165 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1467 3 133913551 133917613 Psa3g1467 3 133913551 133917613 ECH