Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1421 ATGCCTTTCACGATGAAGATTCAGCCGATCGATTCTCAGGTGCCGGCCGAGAGGATTAAGCCGGTTGTGAAGTCACGGCTGAAACGACTCTTTGAGCGTCAGTTCTCAGGCGTTCTGAAGAATCCACCGGTGGAGAAGATCAGCGGCGATGAGCTGCATGCACGCAAAGACGGAAACGGAAACGGCATCGTCGATTTCGAACCAAGCTCCGTGTGTCTGGCGAAGATGGTGCAGAGTTTCATTGAAGAGAATCAAGAGAAACATTCCGTTTCCTGTGCTCGCAACTGCTTCAACGGAAACTTGGATGATTGCTCCGACAGTGATCTTCACGCGCTCGGTGGCTCTTCCACCGGTGAAGTGTACGAAACCCTCAAGGGTTTGGTGGCGTGTCCAAATGTTTTTGAAAAGAATTTGTTAGCGGAGATCACAAAGATAATTGAGAAGAACAAAACTGTGTGTAAACGCAAAGACGATAATTGCAGAAAGACTATAACTGATGGATTGTTAACTCTTGGATACGATGCTTCAATTTGCAAATCTCGCTGGGAAAAATCAACTTTCTGTATCGCCGGGGAATATGAATATATTGATGTTGTAATGGGAAAGGAGAGGGTGATAATTGATGTTGATTTCAGATCAGAATTTGAGATTGCTCGATCAACCAAGTCTTACAAAGCGATTCTCCAAACGCTTCCTTATGTTTTTGTAGGGAAGAGTGATCGTTTGCAGAGTATTGTAGCCATAGCTTCTGAGGCAGCGAAACAGAGTTTGAAAAAGAAGGGTTTGCATGTTCCACCATGGAGAAAACTCGAGTACGTTAGATCAAAATGGTTATCTCCTTACACAAGAACCAAACAACCTCTGTTTTGCAATTGGCCTCGTGAAATCAGTGAGGAAACTGAGAGAAAACAGAGGGTTTTGATTGGTGGTGGTGGTGGTGAGTCTGAAGTGAGTCGCGATGAGTCAGAGTCAAAAGTGGTGGTTGAATGGAAGCCACCAGAATTGAAACCCAAAAACTCGCTGACCGGGGTTAAGGTTGTGACTGGTTTGGCAGCTGTCTTTCGTGAAAACCCATGA 1077 0.4522 MPFTMKIQPIDSQVPAERIKPVVKSRLKRLFERQFSGVLKNPPVEKISGDELHARKDGNGNGIVDFEPSSVCLAKMVQSFIEENQEKHSVSCARNCFNGNLDDCSDSDLHALGGSSTGEVYETLKGLVACPNVFEKNLLAEITKIIEKNKTVCKRKDDNCRKTITDGLLTLGYDASICKSRWEKSTFCIAGEYEYIDVVMGKERVIIDVDFRSEFEIARSTKSYKAILQTLPYVFVGKSDRLQSIVAIASEAAKQSLKKKGLHVPPWRKLEYVRSKWLSPYTRTKQPLFCNWPREISEETERKQRVLIGGGGGESEVSRDESESKVVVEWKPPELKPKNSLTGVKVVTGLAAVFRENP* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1421 358 Pfam PDDEXK-like family of unknown function 75 283 IPR006502 -
Psa3g1421 358 PANTHER OS03G0796600 PROTEIN 21 355 IPR006502 -
Psa3g1421 358 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 161 284 IPR006502 -
Psa3g1421 358 PANTHER RNA POLYMERASE SUBUNIT BETA-BETA PROTEIN, PUTATIVE (DUF506)-RELATED 21 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1421 Psa-Chr3 127696370 127699414 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1421 - - gmx:100781835 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1421 3 127696370 127699414 Psa6g1346 6 62884845 62886060 PCT