Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1400 ATGTCTTCTTCTTCTTCAGCACCTCATTACAGTTCTCTCCCTTCATTTTCAAACTCCACACCTCCAAACTTCATCTCACGCGCCACCGCAACAACAAAACCCGTATCCGTCACGCGCAGACCATGGGAAGAAGTTTTCGCACTCTACTCATTCACGCGCCCTTATTCAATCGGCGAAGCCAGCTCGCGCGTGAAGCGTAACCTCAACCACTTCCGCGTTAACTACATCATGATCGTCCTCTTCGTCTTGTTCCTAAGTCTCCTATGGCATCCTGTATCGATCATCGTTTTCTTGGTCTCGCTGGTAGCTTGGTTTTTGCTCTACTTCTTCCGTGAAGAACCGCTTGTTGTGTTTGGACGTTCAATCGACGATAGGGCTTCCGCGGCGGTGCTTGCGGTGGTGACTGTGGTGGCCTTAGGGTTTACCGGTGTTTGGGTGAACGTGTTGGTTTCGGTTGTGGTTGGGGTTTTGGTTGTTGTGTTGCACGCTGCGTTTAGGAGTACGGAGGATTTGTATGTGGATGAACATGAGGGGTATGATGGAGGGTTGCTTTCCTTTGTTGGGGGTACCCCTACAAAACGTACTACAGGGCAAGGTTTTAAATAA 606 0.4967 MSSSSSAPHYSSLPSFSNSTPPNFISRATATTKPVSVTRRPWEEVFALYSFTRPYSIGEASSRVKRNLNHFRVNYIMIVLFVLFLSLLWHPVSIIVFLVSLVAWFLLYFFREEPLVVFGRSIDDRASAAVLAVVTVVALGFTGVWVNVLVSVVVGVLVVVLHAAFRSTEDLYVDEHEGYDGGLLSFVGGTPTKRTTGQGFK* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1400 201 Pfam PRA1 family protein 38 175 IPR004895 -
Psa3g1400 201 PANTHER PRA1 FAMILY PROTEIN 12 193 - -
Psa3g1400 201 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 12 193 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1400 Psa-Chr3 125641714 125643346 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1400 K20359 - gmx:100816074 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1400 3 125641714 125643346 Psa6g3319 6 285469436 285472598 ECH
Psa3g1400 3 125641714 125643346 Psa3g1400 3 125641714 125643346 ECH