Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1392 ATGGATGACATACAGACAGATGATAATGCCAAACCCAGCTTTACACAGATCTTGGTACTCTCATCTATTGGGTTGATATTTCTCATAGCATTGCATTATCACCTCAAAAAGATTCGAGATCAAAAGATCATTCCGCGTTTAAGATTTTCGCGTGCAGGTCACCCCCCAAAGCTTGAAAGATTCTCTCATTACGTAGCTAGGCAAATGGGGTTCAAGGATAGGCGAATCGGTCCTGATATATGTAGATTGGCTTCTGAATACATAAGCAAATATGAGGGGTTTGAAGATGATATATATGCCTATTTTGAGAATGAACCAGATGCTGATTCACTTTATGTCAAGTTGGTGGAAGAGTTTGAGAGATGCATTCTTAGTTACTTTGGATTTCATTGGAACCATTGTGACATATTGATAAGTCAGGTGTTGAGCTCGGACGTTGCCGAGCCAAAAAAGAAGTTAAAGAACATAGTTATGGCCGCTACAAGGGATCAAAGGTTCGAGAGAGTTGCCAAGACTCTGAAGGTGGCTAGTGTTTTTAATACATTAGTGGAAGAGATGAAAGCGATGGGTATTGCAGTAAACGATGATTCTCAATGTACAGAGGTAATGGCTCCGGTGGCTCACAGTGATAGGAGCCCGGTCCTCCTTCTAATGGGGGGAGGTATGGGAGCTGGCAAGAGCACTGTACTCAAGGATATTCTCAAAGAACCTTTCTGGGCAGGAGCATCAGGAAATGCCGTAGTCATTGAAGCTGATGCCTTCAAAGAATCAGATGTCATTTACAAGGCACTTCGCTCAACAGGCCATCATGACATGATTCGAACAGCAGAACTGGTACACCAATCATCCACAGATGCAGCATCATCCCTCTTGGTAACAGCACTAAATGAGGGTCGTGACGTAATTATGGACGGCACACTCTCCTGGGTTCCATTTGTTGTGCAGACAATAACAATGGCTAGAAATGTCCATCGCCGCCGCTATCGCATGGGAGTTGGCTACAGGGTCAACAAAGACAGAACCGTAACCGAAAACTATTGGGAACGAATCGAAGATGAAGAACCTGAACAAGTTGGAGGAAAAAAGAGAAAACCATATAGGATTGAGCTTGTTGGAGTAGTATGTGATGCTTACCTTGCTGTTGTTAGAGGCATAAGGAGAGCTATCATGTCTAGAAGAGCAGTGAGAGTAAAATCGCAATTGAAATCCCACAAGAGATTTGCTGATGCATTTATGACATACTGTCAATTAGTAGACAATGCCCGTCTATACTGCACAAATGCATTGGAAGGCCCGGCCAAGTTGATAGGATGGAAAGATAGAGACAGAACCTTGCTAGTTGATCCAGATGAAATTGACTGTTTGAAGAGGGTTGCGAAGTTAAATGAAGATGCCAACTCCATATATGAACTCTACAAACAACCCAACCCAGCTTGTGAAGCTGGATCCGTATGGAAAGACATTGTATTATCTCCTTCAAGGTTGAACATCCAACAAGAGCTCAAATTTTCAATCCAAGAAATTGAGCGCTTGAAATGA 1539 0.4276 MDDIQTDDNAKPSFTQILVLSSIGLIFLIALHYHLKKIRDQKIIPRLRFSRAGHPPKLERFSHYVARQMGFKDRRIGPDICRLASEYISKYEGFEDDIYAYFENEPDADSLYVKLVEEFERCILSYFGFHWNHCDILISQVLSSDVAEPKKKLKNIVMAATRDQRFERVAKTLKVASVFNTLVEEMKAMGIAVNDDSQCTEVMAPVAHSDRSPVLLLMGGGMGAGKSTVLKDILKEPFWAGASGNAVVIEADAFKESDVIYKALRSTGHHDMIRTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITMARNVHRRRYRMGVGYRVNKDRTVTENYWERIEDEEPEQVGGKKRKPYRIELVGVVCDAYLAVVRGIRRAIMSRRAVRVKSQLKSHKRFADAFMTYCQLVDNARLYCTNALEGPAKLIGWKDRDRTLLVDPDEIDCLKRVAKLNEDANSIYELYKQPNPACEAGSVWKDIVLSPSRLNIQQELKFSIQEIERLK* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1392 512 Gene3D - 196 435 IPR027417 -
Psa3g1392 512 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 512 - -
Psa3g1392 512 Pfam Zeta toxin 207 321 IPR010488 GO:0005524|GO:0016301
Psa3g1392 512 PANTHER UNCHARACTERIZED 1 512 IPR044802 -
Psa3g1392 512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 208 330 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1392 Psa-Chr3 125216783 125220728 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1392 - - gmx:100794775 873.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1392 3 125216783 125220728 Psa3g1392 3 125216783 125220728 ECH