Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1385 ATGTCTGTTGATTCGCTAAACGACGTCGCTTCGTGCTCCCCGGAGATGGAAAAGTTCCTCTGTGAATTGCTGTTGGACTCCACTCAACCCATCTCTGAACGCTTCAGAGCCCTCTTCTCTCTTCGGAACCTCAAAGGCCCCGCTCCTCGCACCGCCCTTATTCTCGCAACTAGAGATTCATCCAATTTGTTAGCACATGAAGCTGCGTTTGCATTAGGTCAAATGCAAGAACGGGAAGCCATTCCTGCATTGACCTCGGTTCTTAATGATCTTTCTTTGCATCCCATTGTTCGCCATGAGGCAGCGGAAGCACTTGGCGCTATTGGATCAGATAGTAATGTTTCTCTTTTGAAGCGAAGTTTGGATTCTGATCCGGCTCAAGAGGTTCGAGAGACGTGTGAATTGGCTCTTCAACGTATTCTGAATTTAAAAGATGCTGCTGCTGCGGATGATTCGACTGCACCGGGTATTTCTCCATTTATGTCTGTTGATCCTGCAGCACCAGCCACGTCTTGTTCTTCGGTGGACCAATTAAGGGAGTTACTTCTTGATGAGGAAAAAGGGATGTATGAGCGATATGCAGCTCTTTTTGCACTTCGAAATGACGGTGGAAACAAAGCCGTTGCTGCTATTATTGATTCCTTGGGTTCCAAGAGTGCTTTACTAAAACATGAGGTTGCATACGTTTTGGGCCAATTGCAAGACAAAGCTGCTTCAGCTGCTCTATCCAATATACTTCGAGATGTGAATGAGCATCCAATGGTTAGGCATGAGGCTGCTGAAGCTCTTGGTTCAATTGCAGATGACCAAAGTGTAGCTCTTCTTGAGGAGTTTACGGCAGACCCGGAAGCTCTTGTCTCACAAAGTTGTCAAGTTGCTCTAAGCATGCTAGAAGCTGAAAGATCAGGGAAATCTTTTGAGTTCTTGTTCATGCGCAATCCAACTGTGGTGTAA 954 0.4623 MSVDSLNDVASCSPEMEKFLCELLLDSTQPISERFRALFSLRNLKGPAPRTALILATRDSSNLLAHEAAFALGQMQEREAIPALTSVLNDLSLHPIVRHEAAEALGAIGSDSNVSLLKRSLDSDPAQEVRETCELALQRILNLKDAAAADDSTAPGISPFMSVDPAAPATSCSSVDQLRELLLDEEKGMYERYAALFALRNDGGNKAVAAIIDSLGSKSALLKHEVAYVLGQLQDKAASAALSNILRDVNEHPMVRHEAAEALGSIADDQSVALLEEFTADPEALVSQSCQVALSMLEAERSGKSFEFLFMRNPTVV* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1385 317 Pfam PBS lyase HEAT-like repeat 255 278 IPR004155 -
Psa3g1385 317 PANTHER PBS LYASE HEAT-LIKE PROTEIN 22 242 - -
Psa3g1385 317 PANTHER PBS LYASE HEAT-LIKE PROTEIN 218 302 - -
Psa3g1385 317 Pfam HEAT repeats 55 137 - -
Psa3g1385 317 Gene3D - 161 309 IPR011989 -
Psa3g1385 317 Gene3D - 4 154 IPR011989 -
Psa3g1385 317 Hamap Deoxyhypusine hydroxylase [DOHH]. 17 307 IPR027517 GO:0008612|GO:0019135
Psa3g1385 317 SMART E-Z type HEAT repeats 253 282 IPR004155 -
Psa3g1385 317 SMART E-Z type HEAT repeats 189 218 IPR004155 -
Psa3g1385 317 SMART E-Z type HEAT repeats 220 249 IPR004155 -
Psa3g1385 317 SMART E-Z type HEAT repeats 62 91 IPR004155 -
Psa3g1385 317 SMART E-Z type HEAT repeats 95 124 IPR004155 -
Psa3g1385 317 SMART E-Z type HEAT repeats 31 60 IPR004155 -
Psa3g1385 317 PANTHER DEOXYHYPUSINE HYDROXYLASE 22 242 - -
Psa3g1385 317 PANTHER DEOXYHYPUSINE HYDROXYLASE 218 302 - -
Psa3g1385 317 SUPERFAMILY ARM repeat 95 298 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1385 Psa-Chr3 124090526 124093013 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1385 K06072 - gmx:100815364 506.138