Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1371 ATGTTTAGCAGACCAAGTAGTTCCGGTGCTTTTAGTATATTCAATTGGAAAAAGCGAAGTCCTTCATCTCTGACAAGAGGTTTACTTAATGATTCGCCAGAGATTGAATTGTCTGCTTACGGAAAAATCCCAAGTCCAGGAAGTGAGAGCCCTTCAGATCTCCTTAATAGCGAAAGTGTATATGTAGAACCAATTGCTGATTTGGATCTCTTCTTTGAAAGACTTTACAGCTACTACTGCGAGAAAGGGCTATGGTGCATTGTTATAAAGTGGATTGTTGAACTTCTAAGTCTGGGGTTCACCATATGCTTTTCAGGATTTTTTTTATTATATGTTGATTGGAATGGACTCCGTGATGCAAAATGTGGGATGGATGCAGTCGAATCTGGAATTAAGCCCTGTGATCTTGGCAAAGAAGCTCTTCATCAACACCCTTTAACCCCACTGACACTTACCAAAGCTATTATTGTTGGATACTTGGGAATTTTTTCGATCTATTGGATATTTTGCTTTTTGAGATTCTTTGCTCAACTAAGGGATACTCTGGAAATCCGTCAGTTTTACTACAATAGTCTCCATGTTACTGACAATGAAATTCAAACTATGCCCTGGGCCACAGTTGTTGACAAAGTTGTTCTCGTCCAGAGTACTCGAAAACTATGCGTGCTAAAGGATCTTTCTGTCCATGATATAGTCATGAGACTGATGCGAAAGGAGAACTACTTAATCGGAATGCTCAACAAGGGTGTGCTTGCTTTCCCCATTTCACAATGGTTTCCAGGTGCTGGTCCTACAGTTCAATCTAGTCCCGATGGAGCACAACATCGTTTAGTGCTTACCAAAACCCTTGAATGGACTTTAAATTGGTGCATACTTCAGAGCATGTTTGATCGAAACTTCTGTGTCAGAAGGGATTTTGTGTCAAATCCAAAGACATTAAAGAAAAGGCTTATGGTAGTTGGGTTTGCAATGCTTTTACTTTCTCCGTTCCTTGTCATATTCATGCTGGCATATCTATTTCTGAAGCATGCTGAGCAATTTTATAATCATCCAAGCACTGCATCGTCTCGAAGATGGTCAAATTTGTCTAGGTGGATGTTTAGGGAATTCAATGAGGTGGACCATCTCTTCAGGCATCGGATTAATAACAGTGTATTGCATGCTTCTGATTATCTCAAGCAGTTTCCATCACCTATCATATCTATCATTGCAAAATTCATATCTTTTGTATCCGGTGGATTTGCTGCAGTTCTGATAATTATTGCTTTTCTCGAGGAGTCTCTTCTAGAGGGCCATATATTTGGTCGGAACTTGTTTTGGTATGCTGCTGTTTTTGGAACTATAACGGCTATTAGCCGGGCTGCAATTGCAAATGAGCTTCTTGTATTAAATCCTGAGGGAGCAATATCTATGGTGGTTCAACATACACATTATATGCCAAAGAGATGGCGTGGCAAAGAAATCACTGAACTGGTTCGCCTTGAGTTTGAAACCTTATTCCAGTATACTGGAATGATGTTACTTGAGGATATGGCTTCAATTTTCCTCACTCCATACTTACTTCTATTTGTTGTCCCAAAGCGAGTTGATGATATCTTACAGTACATTGCTGATTTCACTGTAAATGTTGAAGGCGTTGGGCATGTTTGCAGTTTAAGCACCTTTGATTTTCAAGAGCATGGAAACACTCATTACGGTTCCCCATACAATGCCCCTCGTAGCCGGAGGAGTTCACAAGGAAAGATGGAGAAATCGTTGTTGAGCTTTCAGAGTAGTTACCCATCATGGGAACCAAATGCTCAGGGGAAGCAGTTTTTTCAAAATCTAAGAACATTCAGAGAGCGGAAGTTATCAGTATATGGAAACCAACACAGATCTTCATCTCCTAGAATCTGGAGGGGTAGTCCCAATATGAGAGGCACTGGAGACAGAAACAGATTTATATCTAAGGAAATGCCATACAGTACTTTTATAACGGGCAATCACTTGGGTTCTTTGTGGCTGATTGAAGCCAACCAGAATAATCACCCCTATCTTCTTGATTGGTACTACACGTCTCAACCTCATGAAACAACTTTGAGTGATGTTCCATTAGAACCATATGGAGTAACAGAACATTATTCCAGAGACTATTCAATGCCCTCGAACTTGCAACAGAGCGAACCCCAGTATGAAGAGTACTCAAACAAGTACCAAGAGGAACGGTCTGGATCTCATCTTGGGGCTTCCACATCAGCTCCCATCTTTAGGGAGAGCCTTATTCAGGATCAAAATTATAATGAACTTCCCCAAGCTACTAGAAGCCAATGGTGGGCTAGAAGTCGCCTACATAGTGGAAAGGCTCAGACAAGCTTCTTTGAGCCTCCGGATTTCAATGACCAAACAGGGTGGGCTAGAAGTCGCCTCGATAGTGGAAAGGCTCAGACAAGCTTATCTGAGCCTCCGGAATTCAATGACCAAACAGGGTGGGCTAGAAGTCGTCTACATAGTGGAAAGACTCAGACAAGCTTCTTTGAGCCTCCAGATTTCAATGACCAAACACAGTGGGCTAGAAGTCGCCTACATAGTGGAAAGGCTCAGACAAGCTTTTTTGAGCCTCCAGATTTCAATGACCAAACAGCATATAATTATCATGACAAGTTTTCTGATAGAGGTTCCGAGGATCAAGATCAAGAACGACACTCTTACTGGAGAGATCATCACAACAAATTATCTAGTACAGCACTGACTGATGACTTAGAGGCAGGGGAATTTAATCTACATTTTGGTGATATATATAGCAAACCACCAGAAACCCCCACTGCAAGCTTTTGA 2814 0.4136 MFSRPSSSGAFSIFNWKKRSPSSLTRGLLNDSPEIELSAYGKIPSPGSESPSDLLNSESVYVEPIADLDLFFERLYSYYCEKGLWCIVIKWIVELLSLGFTICFSGFFLLYVDWNGLRDAKCGMDAVESGIKPCDLGKEALHQHPLTPLTLTKAIIVGYLGIFSIYWIFCFLRFFAQLRDTLEIRQFYYNSLHVTDNEIQTMPWATVVDKVVLVQSTRKLCVLKDLSVHDIVMRLMRKENYLIGMLNKGVLAFPISQWFPGAGPTVQSSPDGAQHRLVLTKTLEWTLNWCILQSMFDRNFCVRRDFVSNPKTLKKRLMVVGFAMLLLSPFLVIFMLAYLFLKHAEQFYNHPSTASSRRWSNLSRWMFREFNEVDHLFRHRINNSVLHASDYLKQFPSPIISIIAKFISFVSGGFAAVLIIIAFLEESLLEGHIFGRNLFWYAAVFGTITAISRAAIANELLVLNPEGAISMVVQHTHYMPKRWRGKEITELVRLEFETLFQYTGMMLLEDMASIFLTPYLLLFVVPKRVDDILQYIADFTVNVEGVGHVCSLSTFDFQEHGNTHYGSPYNAPRSRRSSQGKMEKSLLSFQSSYPSWEPNAQGKQFFQNLRTFRERKLSVYGNQHRSSSPRIWRGSPNMRGTGDRNRFISKEMPYSTFITGNHLGSLWLIEANQNNHPYLLDWYYTSQPHETTLSDVPLEPYGVTEHYSRDYSMPSNLQQSEPQYEEYSNKYQEERSGSHLGASTSAPIFRESLIQDQNYNELPQATRSQWWARSRLHSGKAQTSFFEPPDFNDQTGWARSRLDSGKAQTSLSEPPEFNDQTGWARSRLHSGKTQTSFFEPPDFNDQTQWARSRLHSGKAQTSFFEPPDFNDQTAYNYHDKFSDRGSEDQDQERHSYWRDHHNKLSSTALTDDLEAGEFNLHFGDIYSKPPETPTASF* 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1371 937 Pfam Autophagy protein ATG9 63 556 IPR007241 GO:0006914
Psa3g1371 937 PANTHER AUTOPHAGY-RELATED PROTEIN 9 1 795 - -
Psa3g1371 937 PANTHER AUTOPHAGY-RELATED PROTEIN 9 849 937 - -
Psa3g1371 937 PANTHER AUTOPHAGY-RELATED PROTEIN 9 823 847 - -
Psa3g1371 937 PANTHER APG9 AUTOPHAGY 9 823 847 IPR007241 GO:0006914
Psa3g1371 937 PANTHER APG9 AUTOPHAGY 9 849 937 IPR007241 GO:0006914
Psa3g1371 937 PANTHER APG9 AUTOPHAGY 9 1 795 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1371 Psa-Chr3 122895647 122902710 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1371 K17907 - gmx:100777405 1342.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1371 3 122895647 122902710 Psa3g1371 3 122895647 122902710 ECH