Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1354 ATGGAGAAAAACGAAGAAACTCCTCTCTTCTGGTTCGAAACTTCCAACTCCGTCTGTAGCCGCCACCAATTTCAACCCGACGGTCAACTTTCAGTAATTCTTGTTGATGATTCTAGACCCTTATATCAAAAGGTTGCTGGATCTTTCATGAACAAGTTTTTCCCCTCTGGTTATCCATACAGTGTAAATGAAGGCTATCTCAGGTACACACAGTTTCGAGCAGTGCAACATGTTACTAGTGCTGCAATGTCAGTGCTATCAACTCAGTCACTGCTAATTGCTGCAGGGTTGCGGCCGACTCCTGCTCAGGCAACTGCTGTTAGCTGGATTTTAAAGGACGGAATGCAACATGTAGGGAAGATAATATGTAGTAATTGGGGCGCAAGAATGGATTCCGAGCCTAAACGATGGAGGTTGCTGGCTGACGTGCTTTATGATTTGGGCATGGGCTTGGAAGTGCTTTCTCCATTGTGTCCACATCTTTTTCTTGAAATGGCAGGCCTAGGAAATTTCGCCAAGGGGATGGCTGTTGTTGCAGCCAGAGCAACACGATTGCCTATATATTCCTCGTTTGCTAAAGAGGGAAATCTCAGTGACCTATTTGCTAAAGGGGAGGCTTTTTCAACTCTCTGTAATGTTGTGGGAATTGGAATTGGAATTCGATTAGCTTCTACTATATGTGCATCAATGCAGGGAAAGTTGGTCATTTGTCCTCTCCTTTCAGCTATACATATATACTCAGTGTCTGAAGAGATGAGAGCTACTCCTATCAATACTTTGAATCCACAAAGAACTGCAATGATAGTGACTGATTTTCTCAAGGCAGGAATTGTATCAAGCCCTGCTGACCTAAGATATAAAGAAAATCTACTTTTTCCTGTGAGACTCGAAGATGCTGGGAATGTAAGAGTCGGAAAATCTTTACACGAGGTTATTAAGCCATCGAAGCTTGTTGAACTAAAACAAGTATTCCCTAAGGAGAAGTTTCTTTTAAATCGTGGGGGTAAGTGCATTGACATGGTATTGAAACAAGATGCTAGTGGTGAAGATGCATTGAGAGGCTGGCTAGTTGCTGCATTTGCTGCACAAATTGAGAGTTCTTCCCATGAGCTTAGTGCTAGTGTTCTGCAAGACGCCTATGACAAAATGAATGGAGTCTTTCCTGTATTTTTAAAAGAATTACAGAGGAAAGGATGGCACACTGATCGGTTTCTGGATGGAACCGGTAGCCGCTTCGCATTCTAG 1245 0.4297 MEKNEETPLFWFETSNSVCSRHQFQPDGQLSVILVDDSRPLYQKVAGSFMNKFFPSGYPYSVNEGYLRYTQFRAVQHVTSAAMSVLSTQSLLIAAGLRPTPAQATAVSWILKDGMQHVGKIICSNWGARMDSEPKRWRLLADVLYDLGMGLEVLSPLCPHLFLEMAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAFSTLCNVVGIGIGIRLASTICASMQGKLVICPLLSAIHIYSVSEEMRATPINTLNPQRTAMIVTDFLKAGIVSSPADLRYKENLLFPVRLEDAGNVRVGKSLHEVIKPSKLVELKQVFPKEKFLLNRGGKCIDMVLKQDASGEDALRGWLVAAFAAQIESSSHELSASVLQDAYDKMNGVFPVFLKELQRKGWHTDRFLDGTGSRFAF* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1354 414 Pfam Vitamin B6 photo-protection and homoeostasis 44 275 IPR006968 -
Psa3g1354 414 PANTHER PROTEIN ROOT UVB SENSITIVE 2, CHLOROPLASTIC 3 414 - -
Psa3g1354 414 PANTHER RUS1 FAMILY PROTEIN C16ORF58 3 414 IPR006968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1354 Psa-Chr3 121750411 121754368 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1354 - - gmx:100820508 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1354 3 121750411 121754368 Psa3g1354 3 121750411 121754368 ECH