Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1333 ATGGGTTCTCTACCGGCATTTCCAAACGGTTATCCTCCAAAACAAAGAATTAACAGGCTAATTGACGAAACTACCCTCGCTGATCTCTTCAAATCCCAGCAAAACCATCTCAACTTCTTCTTCGACCGCATCGACCATTCCCAAACCCTAGCATTCACACGCACTCTCCTCGATGCTTCCGGCACCGTCTTCTTCACCGGCGTCGGTAAATCCGGCTTCGTGGCGCATAAAATCTCTCAGACACTCGTTTCCCTCGGTATCCGTTCTGCTTTCCTATCCCCCGTCGATGCTCTGCACGGTGACATCGGAATCCTCAGTGACCGTGACGTGCTCGTTCTCTTAAGCAAATCTGGTGCCACCGAGGAGCTTATTCGCCTTGTTCCTTGCGCTAGAGCTAAAGGTGCGTGTCTCATTGCTGTGACGTCCGTTGAAGGGAACGCGCTTTCGGTAGTGTGTGATATGACCGTGCATTTGCCGTTGGAGAGGGAGCTTTGTCCGTTTAACCTTGCGCCTGTCACTTCCACTGCAATTCAGATGGTTTTCGGTGATACGGTGGCTATTGCGCTCATGGCTGCAAGGAATCTCACCAAGGATGAGTATGCTGCTAACCATCCCGCCGGTAAAATCGGCAAGAGCCTCATCTTTAAGGTAAGAGATGTGATGAAGAAAGATGAGGAGCTTCCAATTTGCAGGGAATCAGATTTGATTATGGATCAGCTTGTGGAGCTGACGAGTAAAGGATGTGGATGCCTTCTTGTTATTGATGATGATCGTCGTCTGATTGGGACATTTACCGATGGTGATCTGCGTCGTACCCTCAAAGCTAGTGGGGAAGGCATTTTCAAACTCACAGTAGGGAAAATGTGCAACAGGAATCCGAGAACTATTGGTCCAGATGCTATGGCAGTGGATGCCATGAAGAAGATGGAAGCCCCTCCATCACCAGTCCAATTTTTGCCTGTGATAGATGATGACAATATTGTGATTGGGATTGTCACGTTGCATGGTTTGGTTTCAGCTGGGTTGTGA 1029 0.4888 MGSLPAFPNGYPPKQRINRLIDETTLADLFKSQQNHLNFFFDRIDHSQTLAFTRTLLDASGTVFFTGVGKSGFVAHKISQTLVSLGIRSAFLSPVDALHGDIGILSDRDVLVLLSKSGATEELIRLVPCARAKGACLIAVTSVEGNALSVVCDMTVHLPLERELCPFNLAPVTSTAIQMVFGDTVAIALMAARNLTKDEYAANHPAGKIGKSLIFKVRDVMKKDEELPICRESDLIMDQLVELTSKGCGCLLVIDDDRRLIGTFTDGDLRRTLKASGEGIFKLTVGKMCNRNPRTIGPDAMAVDAMKKMEAPPSPVQFLPVIDDDNIVIGIVTLHGLVSAGL* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1333 342 SMART cbs_1 226 274 IPR000644 -
Psa3g1333 342 SMART cbs_1 292 342 IPR000644 -
Psa3g1333 342 ProSiteProfiles CBS domain profile. 221 283 IPR000644 -
Psa3g1333 342 Pfam SIS domain 60 187 IPR001347 GO:0097367|GO:1901135
Psa3g1333 342 CDD CBS_pair_SIS_assoc 213 338 - -
Psa3g1333 342 ProSiteProfiles SIS domain profile. 52 195 IPR001347 GO:0097367|GO:1901135
Psa3g1333 342 ProSiteProfiles CBS domain profile. 289 342 IPR000644 -
Psa3g1333 342 PIRSF KdsD_KpsF 12 342 IPR004800 GO:0005975|GO:0016853
Psa3g1333 342 SUPERFAMILY SIS domain 27 341 IPR046348 GO:0097367|GO:1901135
Psa3g1333 342 PANTHER - 1 342 - -
Psa3g1333 342 Gene3D - 22 211 - -
Psa3g1333 342 Gene3D - 212 340 IPR046342 -
Psa3g1333 342 CDD SIS_Kpsf 61 188 IPR035474 -
Psa3g1333 342 TIGRFAM kpsF: sugar isomerase, KpsF/GutQ family 61 332 IPR004800 GO:0005975|GO:0016853
Psa3g1333 342 Pfam CBS domain 217 274 IPR000644 -
Psa3g1333 342 Pfam CBS domain 285 340 IPR000644 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1333 K06041 - gmx:100805755 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1333 3 120011439 120014319 Psa3g1333 3 120011439 120014319 ECH