Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1321 ATGTTTTATTCTCAGGCAGCAACTAAAACTCTAGCTCGGCAGTTGATAAGGCTTAGGCAACAGATCGGTAATCTTCAGGGTAGTCGAGCTCAAATGAGAGGCATAGCAACTCACACGCAGGCAATGCATGCCCATTCTTCTGTTGCGGTTGGCATTCAAGGTGCTACCAAGGCAATGGCAGCTATGAATAAGCAAATGGAACCAGCAAAGCAAGCCAAAGTTATGCAGGAATTCCAGAAACAATCGGCACAGATGGATATGACTACTGAAATGATGTCAGATGTCATAGATGATGCCTTGGATGATGATGAAGCTGAAGAGGAGACTGAAGAGCTTACAAATCAGGTGCTTGATGAAATCGGTGTGGATGTTGCCTCGCAGTTATCAGCAGCTCCCAAAGGGAGAGTTGCAACAAAGAATACAGAAAGTGTTGGCAGCTCGGGCATTGATGACCTTGAGAAACGTTTGGCAGCTCTAAGAAACCCGTAA 489 0.456 MFYSQAATKTLARQLIRLRQQIGNLQGSRAQMRGIATHTQAMHAHSSVAVGIQGATKAMAAMNKQMEPAKQAKVMQEFQKQSAQMDMTTEMMSDVIDDALDDDEAEEETEELTNQVLDEIGVDVASQLSAAPKGRVATKNTESVGSSGIDDLEKRLAALRNP* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1321 162 MobiDBLite consensus disorder prediction 133 147 - -
Psa3g1321 162 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 3 4 162 - -
Psa3g1321 162 Gene3D - 4 131 - -
Psa3g1321 162 MobiDBLite consensus disorder prediction 128 162 - -
Psa3g1321 162 Pfam Snf7 6 135 IPR005024 GO:0007034
Psa3g1321 162 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 4 162 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1321 Psa-Chr3 118932201 118936609 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1321 K12192 - gmx:100306343 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1321 3 118932201 118936609 Psa3g1321 3 118932201 118936609 ECH