Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1302 ATGGCAGTAGTTGAAGAAAAAGGTCAAGAGAAGTACACTGAAGATGGCACAGTAGACTTACAAGGTAGACCTGTTTTAAGATCAAAATCTGGAAGATGGAAAGCATGTTCTTTTATAGTAGTGTATGAAATATTTGAGAGAATGGCTTATTTTGGGATAGCAACAAATTTAGTGGTGTATCTTACAAACAAGCTTCATGAGGGTACTGTGGAATCTTCAAACAGCGTTAGCAATTGGTCGGGTTCGGTTTGGTTGATGCCAATCGCAGGAGCTTACGTAGCTGATGCCTATCTTGGTCGATATTGGACCTTCGTGATTTCATCATGCATTTATCTCATGGGCATGTGTTTATTGACTCTAGCAGTTTCACTACCATCATTGAGACCACCACAATGTGCACAAGGTATCCTAGACCAAGATTGCCCTAAGGCATCACCATTGCAAAAAGGTATATTTTTCCTTGCCTTGTACATCATTTCCATAGGCACAGGTGGAACCAAGCCAAACATATCTACTCTTGGAGCAGACCAATTTGATGAGTTTGATACCAAAGAGAGATTCTATAAACTCTCTTTTTTCAATTGGTGGGTTTCTAGCATTATGATCGGTGTCCTTTTCTCCAGTACTTTTTTGGTTTACATACAAGACAACGTCGGTTGGGCCTTTGGATACGGGCTTCCAACCATCGGGCTCGCTATTTCGATAACAATATTTTTGGTAGGGACGCCGTTTTATAGGCACAGACTTCCCTCAGGCAGCCCTATGACTAAGATGCTTCAAGTCTTTGTGGCTGCTATGAGAAAATGGAAAACACTTGTTCCGAAAGATCCTAACGAGCTACATGAGCTAAGTATCGAAGAGTACGCATGTAGCTACAAAAACAAAATTGATCACACATTCTTCTTGAGAATTCTTGACAGAGCGGCGGTAAAAACGGGCGAAACTTCTTCATGGAGGCTTTGTACAGTGACACAAGTTGAGGAAACCAAGCAAATGATAAAAATGATTCCTATTTTGATTTTAACAATTATTCCAAACACAATGCTAGGACAATCATTCACACTCTTTATTAAACAAGGCATCACACTAGATAGGAGAATGGGGCATAATTTCGAAATTCCACCATCAAGTCTCGTAACATTTATAGTTGTCTTTATGTTGATAAGCATTGTAGCCTATGATCGTGTTTTCGTACCTATGATCCGACGCTACACGAAGAATCCTAGAGGCATCACAATCCTACAAAGACTAGGAATTGGCCTAATGCTGCATGTAATCATGATGATAATCTCATGTTTGGTTGAGAGGAAGAGACTCCGTGTTGCAAGAGAAAACAACCTCTTAGGCTTGCATGATAAGCTTCCTCTTAGTATTTTCATTCTTCTCCCTCAATATGCTTTGACAGGGATTGCAGAAAGCTTTGTAGAAAATTCTAAGATGGATTTTTTCTATGATCAAGCACCACAAAGCATGAAAAGTCTTGGAACATCATATACAACAACGAGTTTGGGTTTAGGAAATTTTCTAAGTACTTTTCTTCTCTCGGTTGTTGCTGATATCACCCGAAAAGAAGGTTCTAAAGGTTGGATTTTGGATAACCTAAACATATCCCGTTTAGATTATTATTACGCATTCTTGGTGGCACTAAGCGTACTCAACTTCCTTTGCTTTCTAGTTGTTTCGAAGCTATATGTATATAATGTTGATGTAAGACAAAACAAATCATGCTTGGAGATGAACCCTGCTGATTCATCTCTGGACAAGTCTAGAATAAGCCAAAGCAGTAGAAGATAA 1794 0.3924 MAVVEEKGQEKYTEDGTVDLQGRPVLRSKSGRWKACSFIVVYEIFERMAYFGIATNLVVYLTNKLHEGTVESSNSVSNWSGSVWLMPIAGAYVADAYLGRYWTFVISSCIYLMGMCLLTLAVSLPSLRPPQCAQGILDQDCPKASPLQKGIFFLALYIISIGTGGTKPNISTLGADQFDEFDTKERFYKLSFFNWWVSSIMIGVLFSSTFLVYIQDNVGWAFGYGLPTIGLAISITIFLVGTPFYRHRLPSGSPMTKMLQVFVAAMRKWKTLVPKDPNELHELSIEEYACSYKNKIDHTFFLRILDRAAVKTGETSSWRLCTVTQVEETKQMIKMIPILILTIIPNTMLGQSFTLFIKQGITLDRRMGHNFEIPPSSLVTFIVVFMLISIVAYDRVFVPMIRRYTKNPRGITILQRLGIGLMLHVIMMIISCLVERKRLRVARENNLLGLHDKLPLSIFILLPQYALTGIAESFVENSKMDFFYDQAPQSMKSLGTSYTTTSLGLGNFLSTFLLSVVADITRKEGSKGWILDNLNISRLDYYYAFLVALSVLNFLCFLVVSKLYVYNVDVRQNKSCLEMNPADSSLDKSRISQSSRR* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1302 597 Pfam POT family 101 530 IPR000109 GO:0016020|GO:0022857|GO:0055085
Psa3g1302 597 SUPERFAMILY MFS general substrate transporter 23 561 IPR036259 -
Psa3g1302 597 PANTHER PROTEIN NRT1/ PTR FAMILY 5.2-LIKE 15 577 - -
Psa3g1302 597 CDD MFS_NPF5 33 566 IPR044739 GO:0042937|GO:0042938|GO:0071916
Psa3g1302 597 Gene3D MFS general substrate transporter like domains 4 572 IPR036259 -
Psa3g1302 597 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 15 577 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1302 Psa-Chr3 117620901 117623278 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1302 4 581 Organic Solute Cotransporters AT5G46040 59.725 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1302 - - gmx:100807002 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1302 3 117620901 117623278 Psa3g1302 3 117620901 117623278 ECH