Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1224 ATGGATGCAAAAGAAGAAGCAGAACCTAATGAGGATAGACCCACATCTCCAATGTGGGTTCTACAACAGATATCTGAAGGAGCCTTTAGAGTTGCTGGGGAAGCATTGCAAAATATGTACTCTGCCGGTGGATCAAACTCGCCACAAGTAGGGCCTAGTGTTGCACATAGGAGAAGTCAGAGTGAAGTTGTGACTAAAGATTTTCAACGTAGTAATAGTTTTCAGAAGTTAAAAGCTCATGTGCATAAGGCATGGTGGGGTGGAAAATCAAAGGAAGAAACTTTACTCAGTTTCAATCCCGAGGTCATGGCGAACCAGAAACGTCAGTGGTATCAGCTTCATCCCAAATCTATGGATTGTATAAATTATAAGGAGCCAACCTCGCTCTTTGAACATTTTGTGGTTGTGGGGCTGCATCCAGATGCTAATTTGGAAGTCGTGGAGCACTCGTTTGCAAGAAGGAAGAAATGGGAAAGAGAGACGGAAAACAATGAACATCTAGATTACAGGATTCCGCAGCAACAAAGGCCGCCAGAACCAACTTTGGAACCTCAGATACTGTTCGTATATCCTTCTGCGAAGAGGTTGACAGTGCGTTTGAAAGATTTAGCCTCCTTTTGCTTTCCTGGAGGTGTTAAGGCAGGGTTGTTGGAGAGAACTCCATCTCTAAGTGAACTAAACGAGCTAGTCTATGGACAGGAGCATTTGGGAAGAGATGATCTATCGTTTGTCTTTAATCTCAAGGCAGCAGACAGTACAACACTTTATGGAGTTTGCTTACATGTGCCTGAAATTGTTCAGAGGCCCCCTGGCATTTTAGGCACATCATCTCCTCTTTCTTTTCCCTCTGGGTTATGCAGCCGTTTTCTGGTTTCTGCACCTCGCTGTTACTGTCTTCTGACTAAAGTTCCTTTCTTTGAGTTACACTTTGAGATGTTAAACAGTCTTATTGCACAGGAGCGTCTGAACCGGATTACTCAGTTTGTAAATGAGGTTACTCTCTCTGGTAGCATTCCATCAACACCCAAACTAGATGACCATTTGAGTTCATCTACTAACTCCCCAGAGAGGGAGTCATTTAGTGACTGGATGGCTTGTGCAATACCTCTTGATGGTGCAGCAGTCATTACCGCTGCTGCTGCTGGACTTATATCCGATGATGAAATCCCACAGTTATCACCCAAAATATGGGATTCTCGCTGTCAATCCCCCGTTAGTGTGACTGCCAGTGATGCCTCAGATTGTTGTCAGTATAAGGATATAGATAAGGATGGCAAGAAGAATCAGCAAGATCACGATACGTGTGCTTTCGAAGGACCAGAAACTCACAATTCTGTGGAAAGAATGCATGGAAATTGTGAAGGTGGCCAAGTTTCTCCCAGTGTTGAAACACCTGTATCTGCTCAGGGCCGCACCTTGGAACGGCTAGGAAGTTCTGAGTCACTTTTTAGGAGTCCAGTTAGAAGCATTGTGTCCGAAGATGAGGATCCTCCTTTTTCAAACAATGAAATCGATACTGGGGGTGATTTGTTGATGGAATGGGCTATGGAGCATAAGAATGCTTTACTACAGATAGTGTGCAGATATCATGCTCAAGCTATTCCACCTCGAGGAAGTGAATTTGTCTTCCACCCTCTTGAACATTTACAAGCTATTCAATATATACGGCATTCAGTTGTTTCTCTTGGCTTCGAAGAAAATTGTTTAGATTGTTCTGAACCAACTGAGGTCAATGCAAAGTTGGCAGCTGCTGAGGAAGCCCTTTCACTATCAGTATGGACAACGTCAACTACTTGTCGAGTTCTATCCCTTGATACTTTGCTGGCATTACTTACAGGAGTGTTTATTGGAAAAACAGGTTGTAATAGTGTGCCCAAATTTGGGTGTTCTATCTGCAGTAGTGCTTTCTCTTATACCATGATTCGTCCATTTCAGTGGCAGAGTTTACTGCTCCCGGTGAGTCAGTGGATTCAAAAAGCTCTGGTTGGCATACAACATAAACCAGATGATTTGTATATTAAAACTAGTAATCTTGTTGAAGTTGATGTAATGCAAAATCAGGTTAAAATGTGTCATTTGCCTAGACTTCCACGGCAAAGAGATCTTGTTTCTCAGTTAACTCCAATTCATGCCAGACTTTCAAGTGAAAGTTATATTGCAAAAAAGCATACACGGCAAAGAGATCTTGTTTCTCAGTTAACTCCAATTCATGCCAGACTTTCAAGTGAAAGTTATATTGCAAAAAAGCATCCTATACATAGGTGCAACGAAATCCAGGCTGAAATTGCAACTCAGTTTTTGAATGTCATATGGCACTATTTGGAGTCACTTTGTTCGAATTTGAAATCGCACACGATAACTAGTGTGCAATCAAATCACGACAGGGTTTCTTTACTTCTTAAAGATACCTTCGTTGACTCCTTTCCTCTTAGGGATCAGCCATTCATTAAGCTTTTTGTAGATACACAGATATTCACTGTTTTATCAGACTCTTATCTATCGAGCTTTGAGAGCGGCAAATCATAG 2526 0.4204 MDAKEEAEPNEDRPTSPMWVLQQISEGAFRVAGEALQNMYSAGGSNSPQVGPSVAHRRSQSEVVTKDFQRSNSFQKLKAHVHKAWWGGKSKEETLLSFNPEVMANQKRQWYQLHPKSMDCINYKEPTSLFEHFVVVGLHPDANLEVVEHSFARRKKWERETENNEHLDYRIPQQQRPPEPTLEPQILFVYPSAKRLTVRLKDLASFCFPGGVKAGLLERTPSLSELNELVYGQEHLGRDDLSFVFNLKAADSTTLYGVCLHVPEIVQRPPGILGTSSPLSFPSGLCSRFLVSAPRCYCLLTKVPFFELHFEMLNSLIAQERLNRITQFVNEVTLSGSIPSTPKLDDHLSSSTNSPERESFSDWMACAIPLDGAAVITAAAAGLISDDEIPQLSPKIWDSRCQSPVSVTASDASDCCQYKDIDKDGKKNQQDHDTCAFEGPETHNSVERMHGNCEGGQVSPSVETPVSAQGRTLERLGSSESLFRSPVRSIVSEDEDPPFSNNEIDTGGDLLMEWAMEHKNALLQIVCRYHAQAIPPRGSEFVFHPLEHLQAIQYIRHSVVSLGFEENCLDCSEPTEVNAKLAAAEEALSLSVWTTSTTCRVLSLDTLLALLTGVFIGKTGCNSVPKFGCSICSSAFSYTMIRPFQWQSLLLPVSQWIQKALVGIQHKPDDLYIKTSNLVEVDVMQNQVKMCHLPRLPRQRDLVSQLTPIHARLSSESYIAKKHTRQRDLVSQLTPIHARLSSESYIAKKHPIHRCNEIQAEIATQFLNVIWHYLESLCSNLKSHTITSVQSNHDRVSLLLKDTFVDSFPLRDQPFIKLFVDTQIFTVLSDSYLSSFESGKS* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1224 841 Pfam uDENN domain 184 262 IPR005113 -
Psa3g1224 841 SMART uDENN_cls 126 263 IPR005113 -
Psa3g1224 841 PANTHER BNAA09G10210D PROTEIN 726 838 - -
Psa3g1224 841 PANTHER BNAA09G10210D PROTEIN 25 724 - -
Psa3g1224 841 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 25 724 - -
Psa3g1224 841 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 726 838 - -
Psa3g1224 841 Gene3D - 117 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1224 Psa-Chr3 111234300 111240622 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1224 - - gmx:100814487 1212.59