Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1223 ATGGCTGATTTAGATGATTGGCTTTTGGAGGCTGCTGGGGTAAACAGACATTCTCCCCCGTCTAGGAGGGATGGAGAACCTTTGGATGGTGGGAGTGATTCTGATTCTGACTCTGATTCTGATGATGAGCGTGATTATCGGGAGAGAGAGTCGTCTCAGGTTCCTCTAAAGAAGAGAGGAAGAGAAGATGTTAGTGATAATGATGATGGTCATTCTGAGCGCGAGGGGGGCAGCAGTGACGACTCTGATGTCGGTGATGATCTTTATAAGGATGAGGATGACAGGCAGAAACTTTCTGAGATGACTGAACTTCAAAGAGAGATGATTTTGTCGGATAGGGCTAACAAGAAAGACGATAAAGATTTTTTGGGTAGGATAGCATCGAAGCGCGAAAAGGGGAAAATGGGGACTGTATCTAGAAGAGAGTCTCCGCCTCTTCCGTCTTCTCGTGTGCGGTCATCCGCCAGATCTGCTGACAGGTCAGCTGCAAAGGACGGTGCGTTAAATGAACTGCGTGCTAAAAGGTTGAAACAGCAAGATCCGGATGTGAAGCACACGCTGAAAGAGGGGTCTAAAAGTGCGGGATCAGGGCTTTATTCACAGAAAAGGAGACCTAATTCCAGTAGCTCAAGCCATAGCGGAAGTGAGAGTAGGTCCCATAGTGATGATGAAGATTCGGATGGAGATGGAGGGATTATTGACAGCGATGATGATAAGATAATGTCTGAAAAGCCGTCGTTTGAAGACATACAGGAAATCACCATTCAAAGATCAAAGCTTGCTAAATGGTTAATGGAACCATTTTTTGAGGAGTTGATTGTAGGTTGTTTGGTAAGGGTTGGTATTGGTAGATCAAAGACTGGTCCTATCTATAGACTCTGCGTGGTGAAAAATGTTGATGCATCAGATCCAAACCGGCTGTATAAATTAGATAACAAGACTACATACAAGTACTTGAATGTTGTATGGGGAAATGATACTTCTGCTGCTAGGTGGCAAATGGCTATGATTAGTGATTCTCCCCCACTCGAGGAGGAGTTTAAACAGTGGGTTAAGGAAGTAGAGCGTAGTGGTGGCAGGATGCTGACAAAGCTAGATGTGTCTGAGAAAAAGGAAGCCATACAGAAGATCAATAGTTTTGTTTATTCAGCAGCTACTGTGAAGCAGATGTTAGAAGAAAAAAAATCTACCTCGCGGAGGCCACTAAATGTTGCAGCCGAGAAGGACCGGTTGAGAACGGAGTTGGGAATAGCACAAAACAAGAATGATGCAGCCGGAGCAGAGAAGATCAAGACAAGACTACAAGAATTGGAAGATTTCCGGAAAGCTGAGGAGAAGGATGCCAAGGCTTTGAGGCTTTCTGAGATGAACAGAAAGAACAGGTTTGAGAACTTCAAAAATGCATCTGAGTTGAGGCCAGTAAATAAAGCTTTGAAAGCAGGGGAGGCAGGTTACGATCCCTTTTCAAGGAGATGGACTAGATCAAGGAACTACTATAATTCAAAACAGGTTGAAGAGGCTGCAGCTGGAAATAATAGTTCCGGTGATGCAGTGGGTGATAGAGGCAGCAATGGAACGGGTGCGGGTATGGTGGCCACTGCCGAGGCTTTGGAGGCTGCTGCTGATGCTGGGAAGTTAGTCGACACGAGAGCTCCGGTGGATCAAGGGACGGAGTCAAATATACTGCACGATTTTGAGCTGCCAATATCACTAGCCATACTACAAAAGTTTGGTGGAGCACAAGGAGTTCAGGCAGGGTTTATGGCAAAGAAACAGAGAATCGAAGGAATCGTTGGATTTCAAGTCCCAGAAAACGATGGAAGGAGTCATCAGTTGACATTAACAGTTAGTGATTACAAAAGAAGAAGAGGGATTTTTTAA 1881 0.4498 MADLDDWLLEAAGVNRHSPPSRRDGEPLDGGSDSDSDSDSDDERDYRERESSQVPLKKRGREDVSDNDDGHSEREGGSSDDSDVGDDLYKDEDDRQKLSEMTELQREMILSDRANKKDDKDFLGRIASKREKGKMGTVSRRESPPLPSSRVRSSARSADRSAAKDGALNELRAKRLKQQDPDVKHTLKEGSKSAGSGLYSQKRRPNSSSSSHSGSESRSHSDDEDSDGDGGIIDSDDDKIMSEKPSFEDIQEITIQRSKLAKWLMEPFFEELIVGCLVRVGIGRSKTGPIYRLCVVKNVDASDPNRLYKLDNKTTYKYLNVVWGNDTSAARWQMAMISDSPPLEEEFKQWVKEVERSGGRMLTKLDVSEKKEAIQKINSFVYSAATVKQMLEEKKSTSRRPLNVAAEKDRLRTELGIAQNKNDAAGAEKIKTRLQELEDFRKAEEKDAKALRLSEMNRKNRFENFKNASELRPVNKALKAGEAGYDPFSRRWTRSRNYYNSKQVEEAAAGNNSSGDAVGDRGSNGTGAGMVATAEALEAAADAGKLVDTRAPVDQGTESNILHDFELPISLAILQKFGGAQGVQAGFMAKKQRIEGIVGFQVPENDGRSHQLTLTVSDYKRRRGIF* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1223 626 Coils Coil 427 447 - -
Psa3g1223 626 MobiDBLite consensus disorder prediction 42 138 - -
Psa3g1223 626 Pfam Plus-3 domain 249 354 IPR004343 GO:0003677
Psa3g1223 626 Gene3D - 245 377 IPR036128 GO:0003677
Psa3g1223 626 SMART rtf1 244 356 IPR004343 GO:0003677
Psa3g1223 626 MobiDBLite consensus disorder prediction 157 189 - -
Psa3g1223 626 MobiDBLite consensus disorder prediction 193 215 - -
Psa3g1223 626 SUPERFAMILY Plus3-like 246 376 IPR036128 GO:0003677
Psa3g1223 626 MobiDBLite consensus disorder prediction 1 245 - -
Psa3g1223 626 ProSiteProfiles Plus3 domain profile. 244 379 IPR004343 GO:0003677
Psa3g1223 626 PANTHER UNCHARACTERIZED 1 625 - -
Psa3g1223 626 MobiDBLite consensus disorder prediction 142 156 - -
Psa3g1223 626 PANTHER PLUS-3 DOMAIN PROTEIN 1 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1223 Psa-Chr3 111183145 111185902 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1223 K15178 - gmx:100818650 746.888