Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1181 ATGACGGAGGCGAACGATTCGTTTTCGCCTCCGTCCCTCACCACACTCTGCATCGATCATCTCAAACGGAAACTCGTCCTTGGCGATGATGCTGTTGTTGCCATTCTTCCTGATATATACGAACTTCCGTCGCATTTGATTGATGACTTAATCTCGCGTTTACCTCCTATCGGATTGTACAATTTTCAACTTCACTTGCCATTCCAGGATCTGACTAAGGAAGATTGTTTGCACGACGACTCAACAAACAACAAGAGAAAACGTTCCAGGGATTGGAATCTAAATACAGCATGGCGAAAGAAGTTTGAGTTGCGATGGCCTAATCTCATTAATCAGATCCAACCAACCGACTGGCAGAAAGTATACTGGGAGAGCCATGTGCAAAAATGTCTGGATGAAGCAACAGAGAAAGCACTAGTCACATCTTTTAAAGGACGTATTGGTGACATACAGGTTTCAGACGGCACACTGAGCTATATTGGTTTTGTGGGACTTACAATTCAGTCATATCGTAAATATTCAAAACTTTCTTACCATTGCCTACAATTTGGCAGCCATGTGAGTTGTCTGAGACTGCAGAATATTCTGTGTGATACAGAAACTACTCGTTTGTTGAAGGAATGCAAGCTGGAGAATCTTGTGCTAAGATGTATCCGATCTAAGGAACAAGTTGATGGATTATGCAAACTTATCACTCAACATAGAAGAACATTAACGTCGTTGGAGTTTATTCACTGTACAGTCTACATAGACTTTATTAATGCAATACTTGATTCTGTTGTCTCAAAGGGTGTAGAAAAACATGGGATCAAACACCTCTCAATCGTCTCCTCGAGTTTTGGACAATGCACTTTTGCTATACCCAGTGGGCTTGAATCATTTGTGTCTTCAGCAAGGTCCCTGTGCTCATTAAAATTATTTGACAGTCACCTTGGACGGAATTTTGCAAAAGCTCTTTTCATGACTCTTCTCGATGTTTCCTCTAGCATATCTGTCCTTGACCTTTCTGAGAATGAAATAGCAGGATGCTTTTCTCACCTTAACAGGAGACTATCAAGTGGTTCTCATTTGTCTGTTGGAATTGGAAAGTCCTTACAACTGTTGCGCGTACTCAATTTGAGGGGGAACAGTTTACGGAAAGAGGATGCAGAAAGTCTTGGATATGCTCTTGCATACATGCCTAACTTGGAGGACCTAGATATAAGTGACAATCCAATTGAGGATGAAGGAATCAGGCATTTAATCCCACATTTTGCTGGAACATCTGGAACATGCTGCCGTGTGACTTCTTTGAAACTAGAGGCTTGTGACTTGTCCCATGATGGAGTTAATCGTCTTCTTGATTCCTTTTCTCCCCTCAATGCACCATTGAAGTCTCTTTGCATTGCTGAAAATTACCTTGGAAGCAAGGTAGCAGGAGCTTTGGGAAGATTTTTGAGCACGTCTATTGAAGTACTAGATGTTGCAGGCATTGATTTGCGTTCAGCTGGTTTTCAAGAGCTTCAAAGTACGCTGATAATAACGGAGAAGCTTAAGTTGGTGAAAATTAATATAAGCAAAAACCGTGGTGGGATTGAAACTGCCCAGTTTTTGTCAAAACTCTTGTTACAGGCTCCACAACTAGTTGATGTGAATGCAGCAAATAATTCCATGCCTATTGAATCACTGCCCATCATCTCCTCTGCATTAAAACTTGCACAAGGTAAGGTTCAGCATTTGGACTTGACAGGACATAAATGGGACTACAAGCCAGAGCATGCTTCTCTACTCACTGAATTTGTCCATAATGGAAAGCCTGTATTGATTCTTCCATTATTATTAGCCACTGCTGCTCCTTATGACCATGATCCTTAG 1854 0.4142 MTEANDSFSPPSLTTLCIDHLKRKLVLGDDAVVAILPDIYELPSHLIDDLISRLPPIGLYNFQLHLPFQDLTKEDCLHDDSTNNKRKRSRDWNLNTAWRKKFELRWPNLINQIQPTDWQKVYWESHVQKCLDEATEKALVTSFKGRIGDIQVSDGTLSYIGFVGLTIQSYRKYSKLSYHCLQFGSHVSCLRLQNILCDTETTRLLKECKLENLVLRCIRSKEQVDGLCKLITQHRRTLTSLEFIHCTVYIDFINAILDSVVSKGVEKHGIKHLSIVSSSFGQCTFAIPSGLESFVSSARSLCSLKLFDSHLGRNFAKALFMTLLDVSSSISVLDLSENEIAGCFSHLNRRLSSGSHLSVGIGKSLQLLRVLNLRGNSLRKEDAESLGYALAYMPNLEDLDISDNPIEDEGIRHLIPHFAGTSGTCCRVTSLKLEACDLSHDGVNRLLDSFSPLNAPLKSLCIAENYLGSKVAGALGRFLSTSIEVLDVAGIDLRSAGFQELQSTLIITEKLKLVKINISKNRGGIETAQFLSKLLLQAPQLVDVNAANNSMPIESLPIISSALKLAQGKVQHLDLTGHKWDYKPEHASLLTEFVHNGKPVLILPLLLATAAPYDHDP* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1181 617 PANTHER RNI-LIKE SUPERFAMILY PROTEIN 10 617 - -
Psa3g1181 617 SUPERFAMILY RNI-like 220 583 - -
Psa3g1181 617 Pfam Leucine Rich repeat 394 414 IPR001611 GO:0005515
Psa3g1181 617 Gene3D Ribonuclease Inhibitor 166 598 IPR032675 -
Psa3g1181 617 SMART LRR_RI_2 510 537 - -
Psa3g1181 617 SMART LRR_RI_2 393 420 - -
Psa3g1181 617 SMART LRR_RI_2 365 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1181 Psa-Chr3 107283098 107298162 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1181 - - gmx:100817679 758.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1181 3 107283098 107298162 Psa3g1181 3 107283098 107298162 ECH