Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1179 ATGGAGGAAGTGTTGGAACTCACACGCGCCAAAGACACCAAAGAAAGGATGGCCGGTGTGGAGCGTCTCTACCAACTTCTAGAAGCTTCTAGAAAGAGTCTCACCTCTTCTGAAGTTACTTCGCTCGTTGATTCCTGCATCGATCTTTTGAAGGATAACAACTTCCGTGTCTCTCAGGGCGCTCTTCAGTCTCTCGCCTCCGCTGTCGTTCTCTCCGGCGAACATTTCAAGCTTCACTTTAACGCTCTTCTTCCTGCCGTTGTTGACCGCCTCGGTGATGCTAAACAGCCTGTCCGTGACGCCGCGCGGCGATTGCTTCTCACACTCATGGAGGTTTCTTCTCCTACAATAATTGTTGAAAGAGCAGGATCCTCAGCTTGGGCGCACAAAAGCTGGAGAGTCAGAGAGGAATTTACTCGTACTGTAACATCTGCAATTAATCTATTTTCATCTACCGAACTTCCACTTCAACGGGCTATCCTACCTCCTGTTTTGCAGTTGCTGAGTGACCCAAATCTTGCTGTCAGGGAAGCGGCTATTTTGTGCATTGAGGAAATGTATAAACAAGCTGGACCTCAATTTCGTGATGAGCTTCACCGCTACAGTCTTCCTTCATCTTTGGTGAAAGATATTAATGCCAGGCTCGAGGGGATTCAACCAAATATTCGCTCTTCAAATGGTATTCCGAGTGGTTATGTTAGTGGAGAAGTTAAGCCTTTGAATCCCAAGAAAAGTAGTCCAAAGGCGAAAAGTTCTTCAAGGGAAGCCTCTCTTTTTGGAGCAGAAGGTGATGTGACGGAGAAACCCATAGACCCTATCAAGGTATACTCAGATAAGGAGTTAATCAGGGAAGTTGAGAAGATTGCATCTATCCTTGTGCCTGAAAAAGACTGGTCCATTCGTATTGCTGCTATGCAGAGAATTGAAGGTCTTGTTCTAGGAGGCGCTACTGATTATCCTTGTTTTCGTGGACTCCTGAAGCAACTTGGTGGACCTTTAAGTACACAATTGTCAGACAGAAGATCTAGCATTGTAAAGCAGGCTTGCCATTTATTGTGCTTTTTGTCAAAGGAACTCTTGGGCGATTTTGAAGCATATGCTGAAATGTTTATACCAGTCCTTTTCAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTGCAGATAACTGCATAAAAACGATGCTGCGCAACTGCAAAGTTCCCCGTGTGCTTCCCCGTATAGCCGATTGTGCTAAAAATGACCGCAATGCAGTACTTCGTGCAAGGTGTTGTGAATATGCTCTTTTAGTCCTAGAACATTGGCCGGATGCACCAGAAATACTTCGTTCAGCTGAGTTATATGAAGATATGATAAAGTGTTGCGTTTCAGATGCAATGAGTGAGGTACGGTCTACTGCAAGGATGTGCTACAGAATGTTCGCAAAAACTTGGCCAGAGCGTTGTCGTCGCCTATTTACATCCTTTGACCCTGTTATTCAACGGTTAATAAATGAAGAGGATGGAGGAATACACAGGCGGCATGCTTCACCTTCCGTTCGTGATAGAGGTACACCAATGTCTTTACCCAGTCAAGCCTCTGCCTCGTCTAATCCACCTGGTTATGGAACATCTGCAATTGTTGCAATGGATAGAAGTTCAAGTTTATCATCAGGGACATCTGTCTCCTCTGGTGTACTTCTTTCACAGGCAAAGTCACTTGGTAAGGGTACAGAACGTAGTTTGGAAAGTGTGTTGCACGCAAGCAAACAGAAGGTCACTGCTATTGAAAGCATGCTTAGAGGCTTGAATATATCTGATAAGCATAATTTATCGTCTCTTCGATCATCAAGTTTGGATCTAGAAGTTGACCCTCCATCGTCTCGTGATCCGCCTTTCCCAGCTGCTGTCTCTGCATCCAATCATTTGACAAGCTCTTCAACAACAGAACCTACTGCTTATGGTGTCTATAAAGGTAGTAACCGAAATGGTGGTCTGGGTTTGTCAGACATAATCACTCAAATTCAAGCTTCCAAAGATTCTGCCAAGTCATCATATCATAGTAATGTTGAAACTGAGCCATTACCATCATTATCCTCATATTCAACTAGAAGGCCTTCTGAAAGATTACATGAAAGAAGTTCTGTTGATGACATTAGTGACATTAGGGAGGCTAGGCGATTTACGAACCACAACACTGACAAGCAGTATTTGGATGCCCCTTATAGAGATGGAAACTTTAGAGAATCACATAATAGTTATGTGCCTAATTTTCAGAGGCCACTAGTGAGAAAGAATGTAACCGGACGTATGTCTGCTGGCAGGAGGAGGAGTTTTGATGACAACCAGCTATCTCCTGGAGAGATGTCAGGTTATACAGAAGGACCCGCATCTCTTCATGAAGCTTTGAGAGAAGGACTCAGGTCAGGTTCTGACTGGTCTTCTAGGGTTGCTGCCTTTAACTATCTTCACTCACTGTTGCAGCAAGGTCCAAAGGGAACTCTTGAAGTTGTTCAGAATTTTGAGAAGGTAATGAAGTTGTTTTTCCAGCACTTAGATGACCCTCACCATAAAGTTGCACAGGCTGCTCTTTCAACACTAGCAGATATTGTTCCGGCGTGTCGAAAGCCTTTTGAGGGTTACATGGAAAGAATATTACCACATGTCTTTTCCCGGTTAATTGATCCTAAAGAGGTTGTTAGGCAGCCATGTTCTACAACATTGGAAATTGTTAGCAAAACTTACAGTATCGATTCTCTCTTACCTGCACTGTTACGTTCACTAGACGAACAAAGGTCTCCAAAGGCTAAATTGGCCGTGATTGAATTTGCAATCAATTCCTTTAACAAGCATACAATGAATGCAGAAGGTGCTGCTAATATTGGCATACTAAAATTGTGGCTTGCTAAGTTAACCCTTTGGTTCATGACAAGAATACCAAGCTTAAAGAACAGCTATTACTTGCTATATCAGTGTATACTCACTTCGATTCAACTCAGTTCTTAA 2988 0.4341 MEEVLELTRAKDTKERMAGVERLYQLLEASRKSLTSSEVTSLVDSCIDLLKDNNFRVSQGALQSLASAVVLSGEHFKLHFNALLPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSSAWAHKSWRVREEFTRTVTSAINLFSSTELPLQRAILPPVLQLLSDPNLAVREAAILCIEEMYKQAGPQFRDELHRYSLPSSLVKDINARLEGIQPNIRSSNGIPSGYVSGEVKPLNPKKSSPKAKSSSREASLFGAEGDVTEKPIDPIKVYSDKELIREVEKIASILVPEKDWSIRIAAMQRIEGLVLGGATDYPCFRGLLKQLGGPLSTQLSDRRSSIVKQACHLLCFLSKELLGDFEAYAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVPRVLPRIADCAKNDRNAVLRARCCEYALLVLEHWPDAPEILRSAELYEDMIKCCVSDAMSEVRSTARMCYRMFAKTWPERCRRLFTSFDPVIQRLINEEDGGIHRRHASPSVRDRGTPMSLPSQASASSNPPGYGTSAIVAMDRSSSLSSGTSVSSGVLLSQAKSLGKGTERSLESVLHASKQKVTAIESMLRGLNISDKHNLSSLRSSSLDLEVDPPSSRDPPFPAAVSASNHLTSSSTTEPTAYGVYKGSNRNGGLGLSDIITQIQASKDSAKSSYHSNVETEPLPSLSSYSTRRPSERLHERSSVDDISDIREARRFTNHNTDKQYLDAPYRDGNFRESHNSYVPNFQRPLVRKNVTGRMSAGRRRSFDDNQLSPGEMSGYTEGPASLHEALREGLRSGSDWSSRVAAFNYLHSLLQQGPKGTLEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVPACRKPFEGYMERILPHVFSRLIDPKEVVRQPCSTTLEIVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHTMNAEGAANIGILKLWLAKLTLWFMTRIPSLKNSYYLLYQCILTSIQLSS* 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1179 995 MobiDBLite consensus disorder prediction 233 259 - -
Psa3g1179 995 MobiDBLite consensus disorder prediction 505 535 - -
Psa3g1179 995 Gene3D - 1 221 IPR011989 -
Psa3g1179 995 SMART TOG_3 280 512 IPR034085 -
Psa3g1179 995 SMART TOG_3 3 224 IPR034085 -
Psa3g1179 995 SMART TOG_3 782 995 IPR034085 -
Psa3g1179 995 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Psa3g1179 995 Gene3D - 265 504 IPR011989 -
Psa3g1179 995 Pfam HEAT repeat 160 188 IPR000357 GO:0005515
Psa3g1179 995 MobiDBLite consensus disorder prediction 675 698 - -
Psa3g1179 995 SUPERFAMILY ARM repeat 2 936 IPR016024 -
Psa3g1179 995 PANTHER PROTEIN, PUTATIVE-RELATED 28 967 - -
Psa3g1179 995 MobiDBLite consensus disorder prediction 518 535 - -
Psa3g1179 995 PANTHER CLASP 28 967 - -
Psa3g1179 995 Coils Coil 10 30 - -
Psa3g1179 995 MobiDBLite consensus disorder prediction 675 711 - -
Psa3g1179 995 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Psa3g1179 995 Gene3D - 798 987 IPR011989 -
Psa3g1179 995 Pfam CLASP N terminal 282 498 IPR024395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1179 Psa-Chr3 107063694 107072217 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1179 K16578 - gmx:100820523 1655.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1179 3 107063694 107072217 Psa3g1179 3 107063694 107072217 ECH