Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1080 ATGGCAGCCATAACCCGCTTCGTGAAACGCACAACACCCTTTTATTCCTTAGCGCGTGGATTCTCTTCCACTAATTCTCACGCGCCTCCGCGTGAAAATAGGAATATTCAATGGGTTTTCTTGGGTTGTCCCGGCGTCGGTAAAGGCACCTACGCCAGCCGTCTCTGTAACCTCCTCGGCGTCCCGCACATCGCCACCGGTGATCTCGTTCGTCATGAGCTTTCCTCCAAGGGCCCCCTTTCTTCAAAGCTATCAGAAATTGTAAATCAGGGTCAATTAGTGTCGGATGAAATCATTATAAACTTGTTGTCAAAGAGACTGGCTGATGGGCAAGCTAAAGGCGAATCAGGTTTCATTCTTGACGGTTTTCCTCGAACAATAAACCAAGCAGAAATATTGGAAGGGGTGACTGACATTGACTTGGTGGTCAATCTGAAGATCCGAGAAGAAGTACTGCTTGCAAAATGCCTTGGTAGGAGAACTTGCAGTCAGTGTGGAGGAAATTTTAACGTTGCTTCCATTAATATCAAGGGTGAGAATGGTTGTCCTGGAATGAGTATGGCTCCACTTCTTCCTCCTGAGCATTGTATGTCTAAGCTCATTACTCGTTCTGATGATACTGAACCCATAGTCAAAGAAAGGCTTCGTGTATACAATGAATTGAGTCAACCTGTGGAGGGGTTTTACCGTAGCAGAGGAAAACTATTAGAGTTTGAGCTTCCAGGAGGGATCCCGGAATCTTGGCCAAAGTTGCTGCAAGCGCTTAATCTAGATGATTATGAAGAGAAGCAGTCTGTGGCAGCATAA 807 0.461 MAAITRFVKRTTPFYSLARGFSSTNSHAPPRENRNIQWVFLGCPGVGKGTYASRLCNLLGVPHIATGDLVRHELSSKGPLSSKLSEIVNQGQLVSDEIIINLLSKRLADGQAKGESGFILDGFPRTINQAEILEGVTDIDLVVNLKIREEVLLAKCLGRRTCSQCGGNFNVASINIKGENGCPGMSMAPLLPPEHCMSKLITRSDDTEPIVKERLRVYNELSQPVEGFYRSRGKLLEFELPGGIPESWPKLLQALNLDDYEEKQSVAA* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1080 268 Gene3D - 22 257 IPR027417 -
Psa3g1080 268 TIGRFAM adk: adenylate kinase 37 256 IPR006259 GO:0004017|GO:0005524|GO:0016776
Psa3g1080 268 CDD ADK 37 239 IPR000850 GO:0005524|GO:0006139|GO:0019205
Psa3g1080 268 PANTHER ADENYLATE KINASE 28 268 - -
Psa3g1080 268 Hamap Adenylate kinase [adk]. 36 256 IPR000850 GO:0005524|GO:0006139|GO:0019205
Psa3g1080 268 Pfam Adenylate kinase 41 233 - -
Psa3g1080 268 Coils Coil 257 268 - -
Psa3g1080 268 ProSitePatterns Adenylate kinase signature. 118 129 IPR033690 -
Psa3g1080 268 PRINTS Adenylate kinase signature 39 52 IPR000850 GO:0005524|GO:0006139|GO:0019205
Psa3g1080 268 PRINTS Adenylate kinase signature 67 81 IPR000850 GO:0005524|GO:0006139|GO:0019205
Psa3g1080 268 PRINTS Adenylate kinase signature 118 134 IPR000850 GO:0005524|GO:0006139|GO:0019205
Psa3g1080 268 PRINTS Adenylate kinase signature 203 218 IPR000850 GO:0005524|GO:0006139|GO:0019205
Psa3g1080 268 PRINTS Adenylate kinase signature 220 234 IPR000850 GO:0005524|GO:0006139|GO:0019205
Psa3g1080 268 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 256 IPR027417 -
Psa3g1080 268 PANTHER NUCLEOTIDE KINASE 28 268 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1080 Psa-Chr3 101934089 101937171 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1080 K00939 - gmx:102666238 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1080 3 101934089 101937171 Psa6g2855 6 233612759 233615810 PCT