Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1041 ATGGGTTCACTAGAAAGGTCAAAGAAAAAAACCCATTTATGGAAAAAAGCCATGCTTCATTTTTCTCTATGTTTTGTTATGGGTTTTTTCACCGGTTTAGCTCCATCAGGTAAATCTCTAATATTTTCTAGCAAAATTGAAGTTGCATTTGCAGTTTCAAACGTAACAGAGTTTGTAACAGCAGCACCTCAACCTTCTCAAACTTCAACGAAAAATAGTAACAAAAGTTGGATAGCTTCAGCACCGAAAATCCATAGCCAAAAAACAAAGTTGCATGCAAAACCACTACCTCAGTTAAAGCCGAAAAGACTTGTTATCATAGTAACTCCAACTAGCACAAAACTACCTTATCAAAATGTTTTTCTGAGAAGGTTAGCGAATACTATAAAGCTGGTTGATCAACCGGTGCTTTGGATTGTCGTCGAGGCGAAAACCGATTCGCCGGAGTTGTCGGAGATTTTAAGGAAAACTGGTATCATGTACAGACATGTTGTTTTCAGTGAAGAGTTTGAGGATTTAGAAGGTGAATTGAATCATCAGAGAAATTTAGCACTTAGTCACATTGAACATCATAGATTGAGTGGGATTGTTCATTTTGCTGGACTTTCAAATGTTTATGATCTTCAATTCTTTCAACAGCTTAGAGATATTGAGGTCTTTGGGACATGGCCAACAGCATTATTACTTGCAAATAGAAAAAGAGTCATACTTGAAGGACCTGTATGTGACTCATCTCAAGTTATTGGATGGCATTTAAGAAATATGAACAATGAAACAATAACTCCTCCCATTCATATTTCAAGTTTTGCATTCAATAGCTCCATTCTTTGGGACCCTGAAAGATGGGGTAGAACTTCATCTGTTAAACACACTTCTCAGAATTCAATCAAGTTTGTGAAGCAAGTAGTTCTAGAAGATGAAACAAAGTTGAAGGGAATTCCACCATATTGCTCCAAAATATTGTTATGGCGTTTCAACTTCTATGCTCGTGCCATGTCCAAGCATTAA 1008 0.3671 MGSLERSKKKTHLWKKAMLHFSLCFVMGFFTGLAPSGKSLIFSSKIEVAFAVSNVTEFVTAAPQPSQTSTKNSNKSWIASAPKIHSQKTKLHAKPLPQLKPKRLVIIVTPTSTKLPYQNVFLRRLANTIKLVDQPVLWIVVEAKTDSPELSEILRKTGIMYRHVVFSEEFEDLEGELNHQRNLALSHIEHHRLSGIVHFAGLSNVYDLQFFQQLRDIEVFGTWPTALLLANRKRVILEGPVCDSSQVIGWHLRNMNNETITPPIHISSFAFNSSILWDPERWGRTSSVKHTSQNSIKFVKQVVLEDETKLKGIPPYCSKILLWRFNFYARAMSKH* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1041 335 CDD GlcAT-I 103 327 IPR005027 GO:0015018|GO:0016020
Psa3g1041 335 Pfam Glycosyltransferase family 43 125 326 IPR005027 GO:0015018|GO:0016020
Psa3g1041 335 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9-RELATED 1 331 - -
Psa3g1041 335 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 331 IPR005027 GO:0015018|GO:0016020
Psa3g1041 335 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 102 335 IPR029044 -
Psa3g1041 335 SUPERFAMILY Nucleotide-diphospho-sugar transferases 103 329 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1041 Psa-Chr3 98641391 98644043 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1041 1 330 Glycosyltransferase AT2G37090 61.190 2.99e-144 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1041 K20869 - gmx:100785607 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1041 3 98641391 98644043 Psa3g1041 3 98641391 98644043 ECH