Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1021 ATGGACACGAAGCTCCTGAATTTCCAGATCCTTAATGGGTCAATCATTCGGCGCGTGTTCTTCCGCTCAATCATGCTTGCAGCTACCATTTCCATGGTGGCTCTCTTTCGCGCTTTATCAGATTTCGATTTGGGAAATTTGGTTCCCATTGCAAACAGTTTCAGCTGTTTTGCAGATTCGGATGACAACGTTACATCGAACCCCAGTTCAAATTTCTTTCAGAATCGAATCTGGGGCAACATGAATTGTGAAAAAGACGTTAACTTGACAGTGAATGTCGTCACTGAGTTAATGGGTAGACAGTTTTTGAACTGTGAAGCGAATACCCTTTGTGTTGGTGAAGGTTCTTCAATGGCCGTTAAGGCAATGAAACAGTTGGGTTTTTCAACTGTTAGTGGTGTTTACACTAACCGTTTTTTCACACTCAATATGAAGAGAATCGTTTATGAGCTGGATTATCAAGATTCTTCATTTGATTTTGTTTTGTCTAGAGATCTTGATAAGGTTTCTGTTCCTGCTTTGCTTGTACTTGAGGTTGAACGTGTTCTTAAGCCTAACGGAATTGGTGCACTTCTTGTTGGTGCTAAAAGTTCACACCATAATGATTTGATTAGATCAGCTACACCAGTTTCATCATTGTTGAGATCTTCCAGTGTGGTTCATGTTGATTCTATTGATGATGAACTTAACCTTGTTGTTTTCAAGAAAAGATCTGAAAATGCAACAGCTTTTTTCAACCACCATCAGCTTAGTTTACCTACTGATTGTCCTAGTTTGGCGTTAACCAAACCTCTTATAGATCTGATGGAACCTCTTGTGAGTGAGAAACCGAAACCGTCTAACGCGACGCCGGTTTCATATTTGCCCAAGTTTGTAGATGTTTCTACTAGGAAGAGGTTGGTGTATATTGATATTGGGGTAGGAGAGCTTTTGAATGCAAATGTTAGTGATTGGTTTCTACCTTCATATCTTATTGATATTGGGGTAGGAGAGCTTTTGAATGCAAATGTTAGTGATTGGTTTCTACCTTCATATCCAATTGATCAGAAAGATTTCAATGTTTATTTTGTTCACTACAACACTTCCATAATGTTGTCTTATGTGAAGAGACCTGGTATCACGTTTGTTTATCACCCTGGATTAGCCGGTAAGGTCGTCACCGAGGCCGATGTTGATGTTGACGAGGAGGAAGATGAAGAAGTGGATCCTTATGCTGGGGAGGAAGAGTTTGATTTCCTTGCATGGTTCAAAGAAACAGTGCAATATGCTGATTTTGTTGTGTTGAAGATGAATGCAGGTGAAGTTGAACTCAAGTTTCTTTCTGATGTATTTGACAGTGGAGCTATATGCTTTGTTGATGAGTTGTTTCTCAGATGTCCTGATATCACAAGCAAGGAAAGTTGCATGGATGTTTACAAAAGTCTGAGAAGCAATGGTGTCTATGTGCATCAATTGTGGGGAGACTAA 1467 0.3974 MDTKLLNFQILNGSIIRRVFFRSIMLAATISMVALFRALSDFDLGNLVPIANSFSCFADSDDNVTSNPSSNFFQNRIWGNMNCEKDVNLTVNVVTELMGRQFLNCEANTLCVGEGSSMAVKAMKQLGFSTVSGVYTNRFFTLNMKRIVYELDYQDSSFDFVLSRDLDKVSVPALLVLEVERVLKPNGIGALLVGAKSSHHNDLIRSATPVSSLLRSSSVVHVDSIDDELNLVVFKKRSENATAFFNHHQLSLPTDCPSLALTKPLIDLMEPLVSEKPKPSNATPVSYLPKFVDVSTRKRLVYIDIGVGELLNANVSDWFLPSYLIDIGVGELLNANVSDWFLPSYPIDQKDFNVYFVHYNTSIMLSYVKRPGITFVYHPGLAGKVVTEADVDVDEEEDEEVDPYAGEEEFDFLAWFKETVQYADFVVLKMNAGEVELKFLSDVFDSGAICFVDELFLRCPDITSKESCMDVYKSLRSNGVYVHQLWGD* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1021 488 PANTHER PEPTIDE UPSTREAM PROTEIN 325 488 - -
Psa3g1021 488 PANTHER PEPTIDE UPSTREAM PROTEIN 1 326 - -
Psa3g1021 488 PANTHER UPSTREAM ORF PROTEIN, PUTATIVE-RELATED 1 326 - -
Psa3g1021 488 PANTHER UPSTREAM ORF PROTEIN, PUTATIVE-RELATED 325 488 - -
Psa3g1021 488 Pfam Methyltransferase domain 148 188 IPR013216 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1021 Psa-Chr3 96152360 96154623 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1021 - - gmx:100783651 582.022