Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0930 ATGGAATCCCAAGAATCTCAACTTCACTTTGTGTTATTTCCACTTATGTCCCCAGGCCACATGCTTCCTATGATAGACATAGCAACAACATTAACACAACAAAACAACATCATCGTTACCATTGTCACCACTCCACACAACGCTTCTCGTTTCTCACTATCTTCTCACAATATCCGAATACTTCAACTTCAATTCCCATCTCAAGATGCAGGCTTTCCAGAAGGGTGTGAGAATTTCGACATGCTTCCATCAATGTCAATGGGCTACACTTTCTTCGCCGCGGCGAATACCCTTCTTCAAGAACAAGCAGAACAAGCTTTTGAAAAGCTTACACCAAAGCCAAATTGTATAATTTCTGATGTTGGTTTTCCTTACACTTCTCAAATTGCTAACAAATTTGGAATTCCAAGAGTTTCTTTTTATGGGGTTAGTTGCTTTTGTCTTGTTTGGCAACAAAAAGTGGTTATCTCTAATGTTATGGAGAAAATAGCAACAGATTCTGAGTATTTTCTCATACCTGATATCCCTCACAGAATTCAGATCACGAAAGCACAACCCCCGTCGTCATCGAACGATGGCAATTGGAAGGAATTTGTGGATAAAATGGTTGCAGCTGACATGGTTTCTTATGGTGCTATTGTGAATTCTTTTGAGGAATTGGAACCTGAATATGCAAGTGATTTTAAGAGAACTAGGAATGATAAAGTTTGGTGTGTTGGTCCTGTTTCACTTAGAAACAAGAATCACTTAGATATGGCACAAAGAGGGGAAAACAACAAAGTAGCTTCTTCAATTGAAAATTGCTTAAAGTGGCTTGATTTGCAAGAAACGAATTCGGTTATCTATATATGCTTAGGAAGTATATGTAATTTAACTTCTTTGCAGTTCATAGAGATTGGTATGGCATTAGAAGCATGTGAAAGGCCATTCATTTGGGTTATTAGGGAGAGAAACCAAACAGAAGAGTTGAATCAATGGATCAAGGATTCGAGTTTCGAGGAAAGGACTAAGGAGAAAGGTTTGTTGATAAAAGGTTGGGCTCCTCAAGTATTGATACTGTCCCATCCTGCGATTGGGGGATTCTTAACACATTGTGGTTGGAATTCGACGTTGGAAGCAATATGTGCTGGTGTGCCAATGATTACGTGGCCGTTATTTGGCGACCAGTTTTTCAATGAGAGGTTTGTTGTGGAAGTGTTAAGAGTCGGCGTGATGGTTGGAGTGGAGACTCCGGTGAATTGGGGAGAGGAAGAGAATGTTGGTGTGTTGGTGAAGAAAGAAGACATTGAGAGGGCTATAGAGAAGTTGATGGATGGCGCGAGTTATGAGAGTCAAGAGAGAAGAAAAAGAGGTATAGAGCTTGTAGAGATGGCTAAGAGAAGTGTAGAAGAAGGAGGGTCTTCTCAATTGAATGTTACTTTGTTAATTCAAGATATTCTTCAACTCTCAACTAAGTAG 1458 0.3978 MESQESQLHFVLFPLMSPGHMLPMIDIATTLTQQNNIIVTIVTTPHNASRFSLSSHNIRILQLQFPSQDAGFPEGCENFDMLPSMSMGYTFFAAANTLLQEQAEQAFEKLTPKPNCIISDVGFPYTSQIANKFGIPRVSFYGVSCFCLVWQQKVVISNVMEKIATDSEYFLIPDIPHRIQITKAQPPSSSNDGNWKEFVDKMVAADMVSYGAIVNSFEELEPEYASDFKRTRNDKVWCVGPVSLRNKNHLDMAQRGENNKVASSIENCLKWLDLQETNSVIYICLGSICNLTSLQFIEIGMALEACERPFIWVIRERNQTEELNQWIKDSSFEERTKEKGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTLEAICAGVPMITWPLFGDQFFNERFVVEVLRVGVMVGVETPVNWGEEENVGVLVKKEDIERAIEKLMDGASYESQERRKRGIELVEMAKRSVEEGGSSQLNVTLLIQDILQLSTK* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0930 485 CDD GT1_Gtf-like 8 471 IPR002213 GO:0008194
Psa3g0930 485 Gene3D Glycogen Phosphorylase B; 5 266 - -
Psa3g0930 485 PANTHER GLYCOSYLTRANSFERASE 3 485 - -
Psa3g0930 485 PANTHER GLYCOSYLTRANSFERASE 3 485 - -
Psa3g0930 485 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 481 - -
Psa3g0930 485 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 277 443 IPR002213 GO:0008194
Psa3g0930 485 Gene3D Glycogen Phosphorylase B; 267 462 - -
Psa3g0930 485 ProSitePatterns UDP-glycosyltransferases signature. 346 389 IPR035595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0930 Psa-Chr3 87409552 87411572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0930 8 481 Glycosyltransferase AT2G36760 53.209 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0930 K13496 K22771 gmx:112997714 713.375