Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0910 ATGGCATCCAAAGATCAAAAGCTCCACTTTGTGTTGTTTCCAATGATGGCACAAGGTCACATGATCCCTATGATGGATATTGCTAAAATATTAGCGCAACATCCCAACGTTGTCGTTACAATACTAACAACTCCACAAAATGCATCTCGTTTCTCATCAACCTTTCAACGTTTTCTTCAATCTGGCCTACACATTCATCTAATGCAACTCCGATTTCCTTCGAAAGAGGCTAGATTACCAGAAGGGTGTGAGAATCTTGACATGCTAACTTCACTTGGTGCTGCATCAGACTTCTTCAATTCCACAAAGTTTCTACAACAAGAAGCTGAAAAAATATTTGAAGAGTTAACACCGCCACCAAGTTGCATAATCTCTGATATGTGTTTACCATATACAATCCACATAGCTAGAAAATTCAATGTTCCAAGAATTTCTTTTCTTGGAGCATGTTGCTTTTATCTATTGTCTATGTATAATTTACGTGTTAGTAATATGATGCGAACCATGGCTAATAATCCAGATGAGTACTTTGCATTGCCTGGTTTTTCTGAAAAGTTTGAGATAAATATGTCACAAATTGAACTAGGATTAATGGATGAAACTTGGGAGAAGTTTAGCATAGATATGATTAGGGCTGAAGTGGGTTCTTATGGAGTAATTGTGAATTCTTTTGAAGAGTTAGAGTCTGAATTTGTAAAGGATTATAAAAAAGTAAAAAATGATAAAATTTGGTGTATTGGTCCTGTATCACTTAGTAACACTGATAATCTCGATAAGGTTCAAAGAGGTCATAATGATAAGAATGTTTCAGTTGATGAATGGATTCATCTGAAATGGCTTGATTCTCAGAAGCCAGGGAGTGTAATCTATGCATGTTTTGGAAGTTTATGCAATTTCACACCACCACAGATGATAGAGCTTGGTTTAGCTTTAGAAGCAACAAAAAGACCTTTTATATATTCTCAGAAGCCAGGGAGTGTAATCTATGCATGTTTTGGAAGTTTATGCAATTTCACACCACCACAGATGATAGAGCTTGGTTTAGCTTTAGAAGCAACAAAAAGACCTTTTATATGGGTTATAAGAAAGAGAAACAGGTTAGATGAATTGAAAAAATGGATTGAGGAAAGTGGAATTGAGGGTAGAATCAATGGTAGAGGTCTAGTAATTGAGGGTTGGGCTCCTCAATTGTTGATATTGTCACATCCTTCAGTTGGAGGATTCCTAACTCATTGCGGTTGGAATTCTACCATAGAAGCAATATGTGCTGGTGTGCCAATGGTTACATGGCCGCGTTTTAACGATCAATTTTTTGATGAAATTTTGGTTGTGCAAGTATTAAAAGTTGGTGTGAAAATAGGAGTGAAGAGTCCAATGAAATGGGGGGAGGAAGAGGAAACAAGTGTGTTGGTGAAGAAGGAAGATATTGAAAGAGGAATAGAAAGGTTAATGGATGAGACAATTGAAAATGAAGAAAGAAGAAAAAGGATTAGAGAGCTTGGTGAGAAGGCTAAAAAGGCTGTAGAAAAAGGAGGGTCTTCTTACGCAAATGTTACTTTGTTCATTCAAGATATCATGAAACAACAATCAAGCACTAAGGTTGAAGCATGA 1611 0.365 MASKDQKLHFVLFPMMAQGHMIPMMDIAKILAQHPNVVVTILTTPQNASRFSSTFQRFLQSGLHIHLMQLRFPSKEARLPEGCENLDMLTSLGAASDFFNSTKFLQQEAEKIFEELTPPPSCIISDMCLPYTIHIARKFNVPRISFLGACCFYLLSMYNLRVSNMMRTMANNPDEYFALPGFSEKFEINMSQIELGLMDETWEKFSIDMIRAEVGSYGVIVNSFEELESEFVKDYKKVKNDKIWCIGPVSLSNTDNLDKVQRGHNDKNVSVDEWIHLKWLDSQKPGSVIYACFGSLCNFTPPQMIELGLALEATKRPFIYSQKPGSVIYACFGSLCNFTPPQMIELGLALEATKRPFIWVIRKRNRLDELKKWIEESGIEGRINGRGLVIEGWAPQLLILSHPSVGGFLTHCGWNSTIEAICAGVPMVTWPRFNDQFFDEILVVQVLKVGVKIGVKSPMKWGEEEETSVLVKKEDIERGIERLMDETIENEERRKRIRELGEKAKKAVEKGGSSYANVTLFIQDIMKQQSSTKVEA* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0910 536 Gene3D Glycogen Phosphorylase B; 508 522 - -
Psa3g0910 536 CDD GT1_Gtf-like 8 518 IPR002213 GO:0008194
Psa3g0910 536 ProSitePatterns UDP-glycosyltransferases signature. 393 436 IPR035595 -
Psa3g0910 536 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 318 528 - -
Psa3g0910 536 PANTHER GLYCOSYLTRANSFERASE 321 529 - -
Psa3g0910 536 PANTHER GLYCOSYLTRANSFERASE 7 320 - -
Psa3g0910 536 Gene3D Glycogen Phosphorylase B; 277 322 - -
Psa3g0910 536 Coils Coil 490 510 - -
Psa3g0910 536 Gene3D Glycogen Phosphorylase B; 1 276 - -
Psa3g0910 536 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 326 443 IPR002213 GO:0008194
Psa3g0910 536 Gene3D Glycogen Phosphorylase B; 323 507 - -
Psa3g0910 536 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 321 529 - -
Psa3g0910 536 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 7 320 - -
Psa3g0910 536 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0910 Psa-Chr3 86572924 86574856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0910 8 533 Glycosyltransferase AT2G36750 49.240 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0910 K13496 - gmx:100780411 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0910 3 86572924 86574856 Psa3g0910 3 86572924 86574856 ECH