Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0902 ATGTCTCCCGCGATGGCGATGATTGATCAGAGGAATGATGAAGATCATATAATAGAAAGTGAATATCATAAAGGAGTGAAGAACATGTATGAAAAAGGTTATCTTCACAAAGTTCCAAAGAAGTATATATTTCCAGCCTCAGAAAGACCCACCACTAGTATGAATGATTCCAATTCTCCCAAGGAAAATCTTCAGCTACCTGTCATTGATTTTGCGGAACTTATTGGTCCAAATAGGCTACAAGTTCTTCAATCCTTAGCCAATGCTTGTGAACAATATGGATTTTTCCAGCTAGTGAATCATTCCATATCAGATGATATAACAAGATGCATGATAGATGTGATAGGAAGGTTCTTTGATCTTCCAATGGAGGAGAGATCTAAGTATATGACAACTGACATGAGAGCAGCTGTGAGATATGGAACCAGTTTTAGTCAAACAAAAGACTCCGTGTTCTGTTGGAGAGATTTCTTAAAACTCATTTGTCATCCTTTGTCCGATTTTCTTCCTCATTGGCCTGCTTCTCCATCGGATTTTCAAGAAGTGGTTGCCACCTATGCAAAAGAAACCAAACAATTGTTCATGGCAATAATGAAAGCTATCCTAGAAAGTTTAGGAATTATGGAAGACAACCAAGAAGAGATGACAAAAGAAAAGGACAATAATGATAATAATAATATTATGAAAGAATTGGACAATGGAAGCCAAATGTTGGTCACCAATTTCTATCCACCATGTCCTGAACCAGACCTAACCTTAGGAATGCACCCTCATTCTGATTATGGCTTCCTCACATTACTTCTTCAAGATGAAGTTGAGGGTTTGCAAATTCAATTTCAAGACAAATGGCTCACGGTTCAACCTATTCCCAACGCTTTCGTTGTCAACATTGGCGATCATTTAGAGATATTTAGCAACGGAAAATACAAGAGTGTATTACATAGGGTTTTGGTGAATGAAGTTAAGAGTAGAATATCCATTGCTTCACTGCATAGTCTTCCCTTTAACTGCACTGTGAAACCGTCGCCAAAACTCATCGATGAAGAGAATCCAAAGCGTTACATGGACACAGATTTTGGTAGCTTTCTTGCGTATGTGTCCACCAGAGAAACCAAGAAAAAGGATTTCCTAGAGTCAAGAAAATTGACAAATTCATAA 1158 0.3782 MSPAMAMIDQRNDEDHIIESEYHKGVKNMYEKGYLHKVPKKYIFPASERPTTSMNDSNSPKENLQLPVIDFAELIGPNRLQVLQSLANACEQYGFFQLVNHSISDDITRCMIDVIGRFFDLPMEERSKYMTTDMRAAVRYGTSFSQTKDSVFCWRDFLKLICHPLSDFLPHWPASPSDFQEVVATYAKETKQLFMAIMKAILESLGIMEDNQEEMTKEKDNNDNNNIMKELDNGSQMLVTNFYPPCPEPDLTLGMHPHSDYGFLTLLLQDEVEGLQIQFQDKWLTVQPIPNAFVVNIGDHLEIFSNGKYKSVLHRVLVNEVKSRISIASLHSLPFNCTVKPSPKLIDEENPKRYMDTDFGSFLAYVSTRETKKKDFLESRKLTNS* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0902 385 Gene3D - 16 365 IPR027443 -
Psa3g0902 385 Pfam 2OG-Fe(II) oxygenase superfamily 236 331 IPR044861 -
Psa3g0902 385 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 233 333 IPR005123 -
Psa3g0902 385 Pfam non-haem dioxygenase in morphine synthesis N-terminal 66 167 IPR026992 -
Psa3g0902 385 SUPERFAMILY Clavaminate synthase-like 25 369 - -
Psa3g0902 385 PRINTS Isopenicillin N synthase signature 86 103 - -
Psa3g0902 385 PRINTS Isopenicillin N synthase signature 258 279 - -
Psa3g0902 385 PRINTS Isopenicillin N synthase signature 293 319 - -
Psa3g0902 385 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 16 382 - -
Psa3g0902 385 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 16 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0902 Psa-Chr3 85817354 85820255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0902 24 357 Glycosyltransferase AT5G59530 33.430 8.59e-52 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0902 - - gmx:100778488 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0902 3 85817354 85820255 Psa3g0902 3 85817354 85820255 ECH