Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0896 ATGAAACTCTTGGAAAAAGATTTTGCTCTAAACCAAACCGGAACTGTCAAAATAATCGCAGAAGAACCCGACGATGTGTGGCTCCTTTACAACCTCATCACCGTCGGCGATGTCGTCACCTCCGACACCACACGCAAAGTCCACCTCGAATCAAACAAAAACACCGCATCACGTGTCAAACTCACCCTTCATCTCAAAGTCACAAGCCGCGACTTTCACAATGACTCTTCCACCCTCCGCGTCCATGGCCGCAACCTTGAATCAAATCAACACGTCGCTGCTGGTTCGTTCCACACTTTAACTCTCGAAAGAAACAAGCCCTTTGAACTTCGGAAAAAGTTGTGGAGTCCAAACGCCGTCGAAGCTTTATCCGATGCCACCGAGAATTCTTCATCTTCTTCTTCTGACGCGAGTCTTGCTGTTGTTGTTCTCCAACAACACCAAGCGGAGATTCACTTGCTTGGAAAAGGAGTCACCACTCGTTGTTCCAAAATCGAAACCTCTTCACATTCACGTAAAAAATCATCATCCTCTAACGTGTTTTTACGCGATGTTTTTGCGGCTTTTGTGAAGCACGTGGATTTCAAACATGTGAAAAGCGTGGTGATAGCAGGAGATAGTAGAGACAACAATGATAATACTAGTACATCGTTATCTCCAACTACTTTCCGTAGGTTTCTTTTGTCGGAAGCGAGGAGGTTAAGGATGAGGTGTATCGAAGAGAACAAGTCGCGTATCGTTGTTGTAGGATCAAGGTGTAATAGCAATAACAAGAAAGGTAATTATGACTTTGATTTGAGGGAAGTTCTCAATGACGTAGCAGTGATGAATTTGATAAAGGACAGCAACTTAGGGTTAGAGATTAGGGTTTTTAAGGAATTATGGGACATGGTGTGCAACAATTCAGATCGTGTATGTTATGGACCAAAGCATGTAGAGAGTGCGCATGAGATGAAAGCGATTGAGACACTTTTGATAAGTGATGATCTTTATAGGAATGAAGAGATTGATATGAGGAAAAAATATGTTAGTTTGGTGAAATCAGTGAAAGAGGGTGGAGGAAAGGCTTTGGTGTATTCTTCTATGCATGTTTCTACACCACAGTTGGATCAGCTCACTGGTGTTGCTGCCATACTCAGATTTCCATTGCCTGGTCTTCAAGATATGGATGATGATGCTCATGTTTAG 1188 0.4293 MKLLEKDFALNQTGTVKIIAEEPDDVWLLYNLITVGDVVTSDTTRKVHLESNKNTASRVKLTLHLKVTSRDFHNDSSTLRVHGRNLESNQHVAAGSFHTLTLERNKPFELRKKLWSPNAVEALSDATENSSSSSSDASLAVVVLQQHQAEIHLLGKGVTTRCSKIETSSHSRKKSSSSNVFLRDVFAAFVKHVDFKHVKSVVIAGDSRDNNDNTSTSLSPTTFRRFLLSEARRLRMRCIEENKSRIVVVGSRCNSNNKKGNYDFDLREVLNDVAVMNLIKDSNLGLEIRVFKELWDMVCNNSDRVCYGPKHVESAHEMKAIETLLISDDLYRNEEIDMRKKYVSLVKSVKEGGGKALVYSSMHVSTPQLDQLTGVAAILRFPLPGLQDMDDDAHV* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0896 395 Gene3D eRF1 domain 2 137 279 IPR042226 -
Psa3g0896 395 SUPERFAMILY L30e-like 287 387 IPR029064 -
Psa3g0896 395 SUPERFAMILY Translational machinery components 135 282 - -
Psa3g0896 395 SUPERFAMILY Dom34/Pelota N-terminal domain-like 1 127 IPR038069 -
Psa3g0896 395 SMART eRF1_1_2 1 128 IPR005140 -
Psa3g0896 395 PANTHER PELOTA 1 390 IPR004405 GO:0070481|GO:0070966|GO:0071025
Psa3g0896 395 Gene3D - 281 395 IPR029064 -
Psa3g0896 395 Pfam eRF1 domain 1 1 126 IPR005140 -
Psa3g0896 395 Gene3D Pelota, domain A 1 129 IPR038069 -
Psa3g0896 395 PANTHER EUKARYOTIC RELEASE FACTOR 1 (ERF1) FAMILY PROTEIN 1 390 - -
Psa3g0896 395 Pfam eRF1 domain 3 287 383 IPR005142 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0896 Psa-Chr3 84302587 84304400 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0896 K06965 - gmx:100803618 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0896 3 84302587 84304400 Psa3g0896 3 84302587 84304400 ECH