Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0884 ATGGCGGGAGGTAGTAGTAGTAAAAATCGAAGACGGAGAAGATCCGATGAATCTGCATCAGAGTCGGATTCCGACGACCGCCGGCGAACTAGTCGGCGGTCACGGCGGGAGTCAGATGAGTCCAGTGACGATGATGATAGAAGTGGAAGAAAGAAAAAGTCTTCGAGAACAATAACAGAAGAGGAAATTTCACAGTATATGGCTAAAAAGGCACACAGAAAGGCTACGAAAGTTGCTAAAAAATTGAAGACTAATACAGTATCAGGTTATTCCAATGACTCTAATCCATTTGGTGATTCTAATCTCAATGAAAAGTTTGTTTGGCGCAAGAAAATTGAACGCGATGTTACTCAAGGTGTATCTATTGAATCCTTTTCAGTTAAGGCTGAGAAGAAAAGACAAGTAGAAAGGATGGCAGAAATCGAAAAGGTGAAAAAGAGGAGAGAGGAAAGGGCACTTGAGAAAGCACAACATGAAGAAGAAATGGCATTGTTAGCTAGAGAACGTGCTCGAGCTGAGTTCCAGGACTGGGAAAAAAAGGAAGAGGAGTTTCATTTTGATCAAAGCAAAGTTAGGTCAGAAATTAGATTGCGTGAAGGGCGTGCCAGGCCAATCGATGTCCTAACCAAGCACCTCAATGGCTCTGATGATTTGGATATAGAAATAAATGAACCATACATGGTCTTCAAGGGTTTGACTGTTAAAGAAATGAGTGAACTTCGTGATGACATCAAAATGCATCTGGATCTTGACAGGGCAACACCAACGCATGTGGAATATTGGGAGGCTCTCCTTGTGGTATGCGATTGGGAACTAGCTGAATCTCGGAAAAAGGATGCAATTGATCGAGCTAGGGTGCGTGGAGAAGAACCTCCTGCTGAGCTGCTTGCTGAACAAAGGGGTTTGCATTCCAGTGTTGAGCCAGATGTAAAGGACCTTTTACATGGAAAGACACGTACAGAGTTGGAAGCCTTACAGGTTCACATTGAGTCAGAGATGCGTACTGGTACAGCAAAGGTGGTTGAGTACTGGGAAGCCATTTTAAAACACCTCCACATATACAAGGCCAAGGCCTGTTTAAAGGAAATCCATGCTAAAATGTTACGTAAGCATTTGCAACGTCTTGAGCAACCATTGGAGGATGAAGATGAACCGGAGAGTGCTCATGACATGATACCTGATGAGGCATATATTGAGGATGATGCTAAAGTCCGTTCTGCAGATGAGTCATTTTCACCAGAGCCCATTAGAGAGAATCAAGAAGCTGAAGACGAGGCTGGATCATTTTCACCACAACTGTTGCATGATGATGAAAATGAAGAAGCTATTGATCCTGAAGAGGACAGAGCTATACTGGAGCGGAAACGTATGGCTGTAATAGAAGAGCAACAAAGACGAATTCAGGAAGCAATGGCATCAAGGCCTGCTCCATCGGAAGATAATTTAGAGATGAAAGCCATAAAAGCTATGGGAGCTATGGAGGATGGAGATGCAGTGTTTGGATCTGGTGCTGAAGTGAGCCTTGATTCCCAGGTTTATTGGTGGCATGACAAGTACAGACCAAGGAAGCCAAAGTATTTCAACCGTGTTCATACGGGATATGAATGGAACAAATATAACCAGACTCACTATGATCATGACAACCCACCTCCAAAGATTGTTCAAGGGTACAAATTTAATATTTTCTATCCCGATCTTGTAGACAAGATAAAAGCCCCAAACTACACTATTGAGAAGGATGGCAGCAATGGAGAGACTTGCATTATACGATTCCACGCAGGGCCACCATATGAAGATATAGCTTTCCGCATTGTAAACAAAGAATGGGAATATTCTCACAAGAAAGGTTTTAAGTGCACATTTGAACGTGGAATTTTGCATGTGTACTTCAATTTCAAACGCCACCGCTACCGTAGATAG 1920 0.4286 MAGGSSSKNRRRRRSDESASESDSDDRRRTSRRSRRESDESSDDDDRSGRKKKSSRTITEEEISQYMAKKAHRKATKVAKKLKTNTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVTQGVSIESFSVKAEKKRQVERMAEIEKVKKRREERALEKAQHEEEMALLARERARAEFQDWEKKEEEFHFDQSKVRSEIRLREGRARPIDVLTKHLNGSDDLDIEINEPYMVFKGLTVKEMSELRDDIKMHLDLDRATPTHVEYWEALLVVCDWELAESRKKDAIDRARVRGEEPPAELLAEQRGLHSSVEPDVKDLLHGKTRTELEALQVHIESEMRTGTAKVVEYWEAILKHLHIYKAKACLKEIHAKMLRKHLQRLEQPLEDEDEPESAHDMIPDEAYIEDDAKVRSADESFSPEPIRENQEAEDEAGSFSPQLLHDDENEEAIDPEEDRAILERKRMAVIEEQQRRIQEAMASRPAPSEDNLEMKAIKAMGAMEDGDAVFGSGAEVSLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKIKAPNYTIEKDGSNGETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRHRYRR* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0884 639 Pfam Conserved mid region of cactin 167 364 IPR018816 -
Psa3g0884 639 Pfam Cactus-binding C-terminus of cactin protein 515 639 IPR019134 GO:0005515
Psa3g0884 639 SMART CactinC_cactus_3 515 639 - -
Psa3g0884 639 PANTHER POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 25 639 - -
Psa3g0884 639 MobiDBLite consensus disorder prediction 404 448 - -
Psa3g0884 639 MobiDBLite consensus disorder prediction 404 438 - -
Psa3g0884 639 MobiDBLite consensus disorder prediction 1 80 - -
Psa3g0884 639 PANTHER BNAC05G02180D PROTEIN 25 639 - -
Psa3g0884 639 Coils Coil 139 175 - -
Psa3g0884 639 MobiDBLite consensus disorder prediction 9 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0884 Psa-Chr3 82711428 82717011 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0884 K25058 - gmx:100780087 1077.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0884 3 82711428 82717011 Psa3g0884 3 82711428 82717011 ECH