Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0879 ATGGCTTCAACACCATATTCATCTTCTTCATCTATGAAGCTTTTATTGTTCATGGTTCCACTCATAATTATTGCAGGATTAGTTTCTGTATTAGGTCCTAATCCTTCTAATTGGATTCTAATTCAAAATCCACCTCTCTCATGGACTTCACAAAATGTTGTTGCGGTTGATTTTCATCACTCTCTTTTCAATCAATCTTCTACACCTCCAATTTCTATTCAACCTATTATTGATCAACAATTGGGGAACAAAGATAAGGAGAATCTCAATGGCTCCCAAATTGTTCCCAACAACACAAATTCTATGAATGAATCTCATATTCTTCAAGAGAAACAAAACCTCCCAAGAAAGTTCAGCATCTTAGATAGAACAGAAGCTGGTTTACTACAAGCTAGAGCTGCAATAAGAAAAGCAAAAAATGGGAATCAAACACAAGACATAGATTATGTTCCAACAGGACCAATGTATCACAATCCTAATTCATTTCACAGGAGTTATTTAGAAATGGAGAAACAATTCAAAGTATATGTCTACGAAGAAGGCGAACTTCCGGTTTTCCATAATGGACCGTGCAAAAACATATACTCAATCGAAGGCAATTTCATCCATACTATCGAGATGAATGATCAATTTCGAACAAAAGACCCCGAAAAAGCACATGTGTTTTTCCTTCCTTTTAGCGTTGCAATGATGGTCCAATTCGTCTATATACGTGACACTCATGATTTTGGTCCCATTAAGAAAACCGTCAAGGACTATATCAACGTCGTGTCTGAAAAATATCCCTTTTGGAATCGAAGCCTCGGAGCGGATCATTTCATGCTTGCCTGCCATGATTGGGGGCCAGAGACATCAAAGGCAGTTCCAAACTTGTTCAAAAACTCGATTCGAGCCCTTTGCAACGCCAACACCTCTGAGGCATTCAAACCGACAAAGGACGTATCTATTCCAGAAATCAATCTTCGATTTGGTACAACTCACGGTTACCTGGGCGGGCCATCACCATCCAAGAGATCACTTTTAGCTTTCTACGCGGGTGGGCTTCACGGGCCCATTAGGCCGATCTTACTCGAACATTGGGAAAACAAAGACGAAGACATTCAAGTTCACAAGTACCTCCCAAAGGGCGTATCTTACTATGATATGCTCCGAAAAAGCAAGTTCTGTCTTTGTCCTAGCGGATACGAGGTAGCGAGTCCGCGAGTCGTGGAAGCGATTTACACAGGTTGTGTTCCGGTATTAATTTCAGACCATTATGTTCCTCCATTCAATGATGTTTTGAATTGGAAATCATTTTCTGTTGAGGTTTCTGTTAAGGATATACCAAACTTGAAGAAAATATTGACGAGTATTTCTCCAAGACAATATATAAGAATGCAAAGAAGAGTAGGAAATATTAGGAAACACTTTGAGGTTACAAATGAGGTTATTGATATGATGGAGTTATGGTTTAACAAAGTCAAGGAAGATGAACTTGTTAGGGATCACATTACTGTTGTTGAACCGTCTGATGAAACAAGTTATAATAAGATTCTTTTCAAGAATCTTAATCTTGAAAAGATGAAGAATGTATAA 1575 0.3848 MASTPYSSSSSMKLLLFMVPLIIIAGLVSVLGPNPSNWILIQNPPLSWTSQNVVAVDFHHSLFNQSSTPPISIQPIIDQQLGNKDKENLNGSQIVPNNTNSMNESHILQEKQNLPRKFSILDRTEAGLLQARAAIRKAKNGNQTQDIDYVPTGPMYHNPNSFHRSYLEMEKQFKVYVYEEGELPVFHNGPCKNIYSIEGNFIHTIEMNDQFRTKDPEKAHVFFLPFSVAMMVQFVYIRDTHDFGPIKKTVKDYINVVSEKYPFWNRSLGADHFMLACHDWGPETSKAVPNLFKNSIRALCNANTSEAFKPTKDVSIPEINLRFGTTHGYLGGPSPSKRSLLAFYAGGLHGPIRPILLEHWENKDEDIQVHKYLPKGVSYYDMLRKSKFCLCPSGYEVASPRVVEAIYTGCVPVLISDHYVPPFNDVLNWKSFSVEVSVKDIPNLKKILTSISPRQYIRMQRRVGNIRKHFEVTNEVIDMMELWFNKVKEDELVRDHITVVEPSDETSYNKILFKNLNLEKMKNV* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0879 524 PANTHER EXOSTOSIN FAMILY PROTEIN 78 473 - -
Psa3g0879 524 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 78 473 IPR004263 GO:0006486|GO:0016757
Psa3g0879 524 Pfam Exostosin family 170 451 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0879 Psa-Chr3 82598766 82603958 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0879 - - gmx:100806278 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0879 3 82598766 82603958 Psa3g0879 3 82598766 82603958 ECH